RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 CFAP45Q9UL16 551 aa19.17■□□□□ 0.66
USB1-209ENST00000564387 ZNF623O75123 536 aa19.16■□□□□ 0.66
USB1-209ENST00000564387 SLC34A2O95436 690 aa19.16■□□□□ 0.66
USB1-209ENST00000564387 EOMESO95936 686 aa19.16■□□□□ 0.66
USB1-209ENST00000564387 AXLP30530 894 aa19.16■□□□□ 0.66
USB1-209ENST00000564387 ERVK-21P61565 698 aa19.16■□□□□ 0.66
USB1-209ENST00000564387 DNM1Q05193 864 aaKnown RBP19.16■□□□□ 0.66
USB1-209ENST00000564387 PPP2R5AQ15172 486 aa19.16■□□□□ 0.66
USB1-209ENST00000564387 ZRSR1Q15695 479 aaKnown RBP19.16■□□□□ 0.66
USB1-209ENST00000564387 FAM187BQ17R55 369 aa19.16■□□□□ 0.66
USB1-209ENST00000564387 ARSHQ5FYA8 562 aa19.16■□□□□ 0.66
USB1-209ENST00000564387 AXDND1Q5T1B0 1012 aaPredicted RBP19.16■□□□□ 0.66
USB1-209ENST00000564387 PPP4R3CPQ6ZMV5 832 aa19.16■□□□□ 0.66
USB1-209ENST00000564387 ECHDC2Q86YB7 292 aa19.16■□□□□ 0.66
USB1-209ENST00000564387 YME1L1Q96TA2 773 aa19.16■□□□□ 0.66
USB1-209ENST00000564387 NTPCRQ9BSD7 190 aaKnown RBP19.16■□□□□ 0.66
USB1-209ENST00000564387 FZD8Q9H461 694 aa19.16■□□□□ 0.66
USB1-209ENST00000564387 C17orf75Q9HAS0 396 aa19.16■□□□□ 0.66
USB1-209ENST00000564387 TSPAN1O60635 241 aa19.15■□□□□ 0.66
USB1-209ENST00000564387 ATF7P17544 494 aaPredicted RBP19.15■□□□□ 0.66
USB1-209ENST00000564387 NAALADL2Q58DX5 795 aa19.15■□□□□ 0.66
USB1-209ENST00000564387 KCNG4Q8TDN1 519 aa19.15■□□□□ 0.66
USB1-209ENST00000564387 RAD54LQ92698 747 aa19.15■□□□□ 0.66
USB1-209ENST00000564387 KCNN1Q92952 543 aa19.15■□□□□ 0.66
USB1-209ENST00000564387 CLP1Q92989 425 aaKnown RBP19.15■□□□□ 0.66
USB1-209ENST00000564387 FAM161BQ96MY7 647 aa19.15■□□□□ 0.66
USB1-209ENST00000564387 CDX2Q99626 313 aaPredicted RBP19.15■□□□□ 0.66
USB1-209ENST00000564387 CCDC113Q9H0I3 377 aa19.15■□□□□ 0.66
USB1-209ENST00000564387 C2orf40Q9H1Z8 148 aa19.15■□□□□ 0.66
USB1-209ENST00000564387 RNF19AQ9NV58 838 aa19.15■□□□□ 0.66
USB1-209ENST00000564387 STK17AQ9UEE5 414 aa19.15■□□□□ 0.66
USB1-209ENST00000564387 PCDHB7Q9Y5E2 793 aa19.15■□□□□ 0.66
USB1-209ENST00000564387 ADGRA3Q8IWK6 1321 aa19.15■□□□□ 0.66
USB1-209ENST00000564387 CUTAO60888 179 aa19.14■□□□□ 0.65
USB1-209ENST00000564387 HIP1RO75146 1068 aa19.14■□□□□ 0.65
USB1-209ENST00000564387 UBXN11Q5T124 520 aa19.14■□□□□ 0.65
USB1-209ENST00000564387 CMTR2Q8IYT2 770 aaKnown RBP19.14■□□□□ 0.65
USB1-209ENST00000564387 CCDC51Q96ER9 411 aa19.14■□□□□ 0.65
USB1-209ENST00000564387 PRIMPOLQ96LW4 560 aa19.14■□□□□ 0.65
USB1-209ENST00000564387 DRC1Q96MC2 740 aa19.14■□□□□ 0.65
USB1-209ENST00000564387 DAXXQ9UER7 740 aaPredicted RBP19.14■□□□□ 0.65
USB1-209ENST00000564387 CCDC39Q9UFE4 941 aa19.14■□□□□ 0.65
USB1-209ENST00000564387 PIN4Q9Y237 131 aaKnown RBP19.14■□□□□ 0.65
USB1-209ENST00000564387 A0A087X0B3 334 aa19.13■□□□□ 0.65
USB1-209ENST00000564387 LRRIQ4A6NIV6 560 aa19.13■□□□□ 0.65
USB1-209ENST00000564387 INO80B-WBP1J3KQ70 363 aa19.13■□□□□ 0.65
USB1-209ENST00000564387 SKIP12755 728 aa19.13■□□□□ 0.65
USB1-209ENST00000564387 POU3F3P20264 500 aaPredicted RBP19.13■□□□□ 0.65
USB1-209ENST00000564387 RAB27AP51159 221 aa19.13■□□□□ 0.65
USB1-209ENST00000564387 EFNA5P52803 228 aa19.13■□□□□ 0.65
USB1-209ENST00000564387 SPRED2Q7Z698 418 aa19.13■□□□□ 0.65
USB1-209ENST00000564387 MRPL10Q7Z7H8 261 aaKnown RBP19.13■□□□□ 0.65
USB1-209ENST00000564387 LARP4BQ92615 738 aaKnown RBP19.13■□□□□ 0.65
USB1-209ENST00000564387 IFT74Q96LB3 600 aa19.13■□□□□ 0.65
USB1-209ENST00000564387 SAMD11Q96NU1 681 aa19.13■□□□□ 0.65
USB1-209ENST00000564387 TGS1Q96RS0 853 aaKnown RBP19.13■□□□□ 0.65
USB1-209ENST00000564387 POLD4Q9HCU8 107 aa19.13■□□□□ 0.65
USB1-209ENST00000564387 FAM105AQ9NUU6 356 aa19.13■□□□□ 0.65
USB1-209ENST00000564387 PRMT7Q9NVM4 692 aaPredicted RBP19.13■□□□□ 0.65
USB1-209ENST00000564387 ARHGAP28Q9P2N2 729 aa19.13■□□□□ 0.65
USB1-209ENST00000564387 LRFN2Q9ULH4 789 aa19.13■□□□□ 0.65
USB1-209ENST00000564387 ODF2LQ9ULJ1 636 aa19.13■□□□□ 0.65
USB1-209ENST00000564387 FNDC1Q4ZHG4 1894 aaPredicted RBP19.13■□□□□ 0.65
USB1-209ENST00000564387 A0A1B0GUA9 196 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 ERLIN2O94905 339 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 ARF4P18085 180 aaPredicted RBP19.12■□□□□ 0.65
USB1-209ENST00000564387 TXLNAP40222 546 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 NPTX2P47972 431 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 ZNF131P52739 623 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 MCM6Q14566 821 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 FOXD4L6Q3SYB3 417 aaPredicted RBP19.12■□□□□ 0.65
USB1-209ENST00000564387 SHC4Q6S5L8 630 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 FOXD4L3Q6VB84 417 aaPredicted RBP19.12■□□□□ 0.65
USB1-209ENST00000564387 ZBTB8OSQ8IWT0 167 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 SPIRE2Q8WWL2 714 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 RSPH1Q8WYR4 309 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 KCNG1Q9UIX4 513 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 PCDHA7Q9UN72 937 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 STXBP5LQ9Y2K9 1186 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 ATP6V1DQ9Y5K8 247 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 COL6A3P12111 3177 aa19.12■□□□□ 0.65
USB1-209ENST00000564387 CNTNAP2Q9UHC6 1331 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 EPOPA6NHQ4 379 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 C5orf67F2Z3F1 127 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 ACKR2O00590 384 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 HOXA2O43364 376 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 PLS3P13797 630 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 NUCB2P80303 420 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 RRAGBQ5VZM2 374 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 TWF2Q6IBS0 349 aaKnown RBP19.11■□□□□ 0.65
USB1-209ENST00000564387 NOTUMQ6P988 496 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 CCDC73Q6ZRK6 1079 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 GPBP1Q86WP2 473 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 FIBCD1Q8N539 461 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 DEPTORQ8TB45 409 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 CASD1Q96PB1 797 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 PRDM12Q9H4Q4 367 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 TMEM134Q9H6X4 195 aa19.11■□□□□ 0.65
USB1-209ENST00000564387 RBM19Q9Y4C8 960 aaKnown RBP19.11■□□□□ 0.65
USB1-209ENST00000564387 RALGAPA2Q2PPJ7 1873 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms