RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 FBXW10Q5XX13 1052 aa14.61□□□□□ -0.07
CLK3-215ENST00000564353 ACTRT1Q8TDG2 376 aa14.61□□□□□ -0.07
CLK3-215ENST00000564353 C18orf8Q96DM3 657 aa14.61□□□□□ -0.07
CLK3-215ENST00000564353 PBKQ96KB5 322 aa14.61□□□□□ -0.07
CLK3-215ENST00000564353 NACC1Q96RE7 527 aa14.61□□□□□ -0.07
CLK3-215ENST00000564353 STK33Q9BYT3 514 aa14.61□□□□□ -0.07
CLK3-215ENST00000564353 NOVA2Q9UNW9 492 aaKnown RBP14.61□□□□□ -0.07
CLK3-215ENST00000564353 GOLGA6L10A6NI86 522 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 ATP2C2O75185 946 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 FTLP02792 175 aaPredicted RBP14.6□□□□□ -0.07
CLK3-215ENST00000564353 GAP43P17677 238 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 TNFRSF8P28908 595 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 EN1Q05925 392 aaPredicted RBP14.6□□□□□ -0.07
CLK3-215ENST00000564353 ZNF844Q08AG5 666 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 SPP2Q13103 211 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 DLGAP5Q15398 846 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 UGCGQ16739 394 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 EGFL6Q8IUX8 553 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 PPM1KQ8N3J5 372 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 MDM1Q8TC05 714 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 PLEKHO2Q8TD55 490 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 TEKT3Q9BXF9 490 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 RAVER2Q9HCJ3 691 aaKnown RBP14.6□□□□□ -0.07
CLK3-215ENST00000564353 TOPORSQ9NS56 1045 aaPredicted RBP14.6□□□□□ -0.07
CLK3-215ENST00000564353 ZNF70Q9UC06 446 aaPredicted RBP14.6□□□□□ -0.07
CLK3-215ENST00000564353 STXBP5LQ9Y2K9 1186 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 TELO2Q9Y4R8 837 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 TCRBV7S2A1N4TA0A589 114 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 CLSTN1O94985 981 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 SGPL1O95470 568 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 PLTPP55058 493 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 PEX3P56589 373 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 MAPK7Q13164 816 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 PPP2R5CQ13362 524 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 RNF187Q5TA31 235 aaPredicted RBP14.6□□□□□ -0.07
CLK3-215ENST00000564353 BTNL9Q6UXG8 535 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 ARHGAP27Q6ZUM4 889 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 RPUSD2Q8IZ73 545 aaKnown RBP14.6□□□□□ -0.07
CLK3-215ENST00000564353 SLC30A5Q8TAD4 765 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 WHAMMQ8TF30 809 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 ZNF341Q9BYN7 854 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 TUFT1Q9NNX1 390 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 TMX2Q9Y320 296 aa14.6□□□□□ -0.07
CLK3-215ENST00000564353 SPDYE2BA6NHP3 402 aa14.59□□□□□ -0.07
CLK3-215ENST00000564353 MYO1FO00160 1098 aa14.59□□□□□ -0.07
CLK3-215ENST00000564353 SHBGP04278 402 aa14.59□□□□□ -0.07
CLK3-215ENST00000564353 MYZAPP0CAP1 466 aa14.59□□□□□ -0.07
CLK3-215ENST00000564353 SPDYE6P0CI01 402 aa14.59□□□□□ -0.07
CLK3-215ENST00000564353 MAGEA9P43362 315 aa14.59□□□□□ -0.07
CLK3-215ENST00000564353 ITGB3BPQ13352 177 aaPredicted RBP14.59□□□□□ -0.07
CLK3-215ENST00000564353 DAB2IPQ5VWQ8 1189 aa14.59□□□□□ -0.07
CLK3-215ENST00000564353 ZHX2Q9Y6X8 837 aa14.59□□□□□ -0.07
CLK3-215ENST00000564353 CCDC169A6NNP5 214 aa14.59□□□□□ -0.07
CLK3-215ENST00000564353 PIK3CDO00329 1044 aa14.59□□□□□ -0.07
CLK3-215ENST00000564353 VIL1P09327 827 aaKnown RBP14.59□□□□□ -0.07
CLK3-215ENST00000564353 RXRBP28702 533 aa14.59□□□□□ -0.07
CLK3-215ENST00000564353 KCNJ1P48048 391 aa14.59□□□□□ -0.07
CLK3-215ENST00000564353 C10orf76Q5T2E6 689 aa14.59□□□□□ -0.07
CLK3-215ENST00000564353 ZNF772Q68DY9 489 aaPredicted RBP14.59□□□□□ -0.07
CLK3-215ENST00000564353 DHX38Q92620 1227 aaKnown RBP14.59□□□□□ -0.07
CLK3-215ENST00000564353 HES6Q96HZ4 224 aa14.59□□□□□ -0.07
CLK3-215ENST00000564353 CNOT8Q9UFF9 292 aaKnown RBP14.59□□□□□ -0.07
CLK3-215ENST00000564353 FRMPD4Q14CM0 1322 aa14.58□□□□□ -0.07
CLK3-215ENST00000564353 DDX3YO15523 660 aaKnown RBP14.58□□□□□ -0.08
CLK3-215ENST00000564353 CYP26A1O43174 497 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 HSPA9P38646 679 aaKnown RBP14.58□□□□□ -0.08
CLK3-215ENST00000564353 SLCO1A2P46721 670 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 KRT71Q3SY84 523 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 FAM102BQ5T8I3 360 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 LMBRD2Q68DH5 695 aaPredicted RBP14.58□□□□□ -0.08
CLK3-215ENST00000564353 SLC47A2Q86VL8 602 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 CBWD2Q8IUF1 395 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 LMBR1Q8WVP7 490 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 RFFLQ8WZ73 363 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 KAT2BQ92831 832 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 SUCLA2Q9P2R7 463 aaPredicted RBP14.58□□□□□ -0.08
CLK3-215ENST00000564353 NENFQ9UMX5 172 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 ALG6Q9Y672 507 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 NRXN2Q9P2S2 1712 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 EIF3DO15371 548 aaKnown RBP eCLIP14.58□□□□□ -0.08
CLK3-215ENST00000564353 ATP9AO75110 1047 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 ENTPD3O75355 529 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 LMNB1P20700 586 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 MAGOHP61326 146 aaKnown RBP14.58□□□□□ -0.08
CLK3-215ENST00000564353 IFFO1Q0D2I5 559 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 TTC31Q49AM3 519 aaPredicted RBP14.58□□□□□ -0.08
CLK3-215ENST00000564353 LLGL2Q6P1M3 1020 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 LARGE2Q8N3Y3 721 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 MAGOHBQ96A72 148 aaKnown RBP14.58□□□□□ -0.08
CLK3-215ENST00000564353 PCDHB18PQ96TA0 734 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 PI4K2AQ9BTU6 479 aa14.58□□□□□ -0.08
CLK3-215ENST00000564353 UTP11Q9Y3A2 253 aaKnown RBP14.58□□□□□ -0.08
CLK3-215ENST00000564353 TESPA1A2RU30 521 aaPredicted RBP14.57□□□□□ -0.08
CLK3-215ENST00000564353 SLFN11Q7Z7L1 901 aa14.57□□□□□ -0.08
CLK3-215ENST00000564353 AGPAT1Q99943 283 aa14.57□□□□□ -0.08
CLK3-215ENST00000564353 NCAPGQ9BPX3 1015 aa14.57□□□□□ -0.08
CLK3-215ENST00000564353 VCPKMTQ9H867 229 aa14.57□□□□□ -0.08
CLK3-215ENST00000564353 TMBIM4Q9HC24 238 aa14.57□□□□□ -0.08
CLK3-215ENST00000564353 DNAJC17Q9NVM6 304 aaKnown RBP14.57□□□□□ -0.08
CLK3-215ENST00000564353 MRPL11Q9Y3B7 192 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms