RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 RAB27AP51159 221 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 MAPK7Q13164 816 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 MCM6Q14566 821 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 DSC3Q14574 896 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 ARSHQ5FYA8 562 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 CATSPER4Q7RTX7 472 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 DAW1Q8N136 415 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 DEPTORQ8TB45 409 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 TMX1Q9H3N1 280 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 TMEM134Q9H6X4 195 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 PARVGQ9HBI0 331 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 SCN5AQ14524 2016 aa18.44■□□□□ 0.54
RNF40-206ENST00000564260 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.43■□□□□ 0.54
RNF40-206ENST00000564260 GOLGA6L4A6NEF3 574 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 TBCAO75347 108 aaKnown RBP18.43■□□□□ 0.54
RNF40-206ENST00000564260 GJB5O95377 273 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 KRT18P05783 430 aaKnown RBP18.43■□□□□ 0.54
RNF40-206ENST00000564260 MAPTP10636 758 aaKnown RBP18.43■□□□□ 0.54
RNF40-206ENST00000564260 SARSP49591 514 aaKnown RBP18.43■□□□□ 0.54
RNF40-206ENST00000564260 FAM189BP81408 668 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 MBTD1Q05BQ5 628 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 MAPK6Q16659 721 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 NOTUMQ6P988 496 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 CLEC17AQ6ZS10 378 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 NPAS4Q8IUM7 802 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 HERC6Q8IVU3 1022 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 TMEM87AQ8NBN3 555 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 LRRC15Q8TF66 581 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 MRPS27Q92552 414 aaKnown RBP18.43■□□□□ 0.54
RNF40-206ENST00000564260 PPP1R16BQ96T49 567 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 OSBPL7Q9BZF2 842 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 FZD8Q9H461 694 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 ARHGAP28Q9P2N2 729 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 PCDHA11Q9Y5I1 949 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 COL4A6Q14031 1691 aa18.43■□□□□ 0.54
RNF40-206ENST00000564260 A0A087X0B3 334 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 A0A0U1RQF3 1178 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 INO80B-WBP1J3KQ70 363 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 POLR2DO15514 142 aaKnown RBP18.42■□□□□ 0.54
RNF40-206ENST00000564260 HOXA2O43364 376 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 EOMESO95936 686 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 SLFN14P0C7P3 912 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 GAP43P17677 238 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 NPTX2P47972 431 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 GIT2Q14161 759 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 MAEAQ7L5Y9 396 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 APBB1IPQ7Z5R6 666 aaPredicted RBP18.42■□□□□ 0.54
RNF40-206ENST00000564260 CEP57L1Q8IYX8 460 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 CNNM3Q8NE01 707 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 RAD9AQ99638 391 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 ADAM2Q99965 735 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 REEP2Q9BRK0 252 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 ST6GALNAC4Q9H4F1 302 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 INSL6Q9Y581 213 aa18.42■□□□□ 0.54
RNF40-206ENST00000564260 LAMA3Q16787 3333 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 FRMD3A2A2Y4 597 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 C9IYK1 514 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 ACKR2O00590 384 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 ZNF623O75123 536 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 FAM13AO94988 1023 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 PFKFB1P16118 471 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 PEX3P56589 373 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 TCTN1Q2MV58 587 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 FAM109BQ6ICB4 259 aaPredicted RBP18.41■□□□□ 0.54
RNF40-206ENST00000564260 CRIPAKQ8N1N5 446 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 PDILTQ8N807 584 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 LINC01599Q8WXQ3 324 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 DDX12PQ92771 950 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 CCDC113Q9H0I3 377 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 MINDY3Q9H8M7 445 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 KMT5AQ9NQR1 393 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 TMEM161AQ9NX61 479 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 MSRAQ9UJ68 235 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 CNTNAP2Q9UHC6 1331 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 TET1Q8NFU7 2136 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 ZMYM2Q9UBW7 1377 aa18.41■□□□□ 0.54
RNF40-206ENST00000564260 K7ERI5 159 aa18.4■□□□□ 0.54
RNF40-206ENST00000564260 TSPAN1O60635 241 aa18.4■□□□□ 0.54
RNF40-206ENST00000564260 SYKP43405 635 aa18.4■□□□□ 0.54
RNF40-206ENST00000564260 NCKAP1LP55160 1127 aa18.4■□□□□ 0.54
RNF40-206ENST00000564260 HTRA4P83105 476 aaPredicted RBP18.4■□□□□ 0.54
RNF40-206ENST00000564260 ALCAMQ13740 583 aa18.4■□□□□ 0.54
RNF40-206ENST00000564260 AMHR2Q16671 573 aa18.4■□□□□ 0.54
RNF40-206ENST00000564260 KANK3Q6NY19 840 aa18.4■□□□□ 0.54
RNF40-206ENST00000564260 MYOCDQ8IZQ8 938 aa18.4■□□□□ 0.54
RNF40-206ENST00000564260 BSNDQ8WZ55 320 aa18.4■□□□□ 0.54
RNF40-206ENST00000564260 DHX58Q96C10 678 aa18.4■□□□□ 0.54
RNF40-206ENST00000564260 HVCN1Q96D96 273 aa18.4■□□□□ 0.54
RNF40-206ENST00000564260 C7orf25Q9BPX7 421 aa18.4■□□□□ 0.54
RNF40-206ENST00000564260 OLFML3Q9NRN5 406 aa18.4■□□□□ 0.54
RNF40-206ENST00000564260 PCDH10Q9P2E7 1040 aa18.4■□□□□ 0.54
RNF40-206ENST00000564260 PIN4Q9Y237 131 aaKnown RBP18.4■□□□□ 0.54
RNF40-206ENST00000564260 MICAL3Q7RTP6 2002 aa18.39■□□□□ 0.53
RNF40-206ENST00000564260 A0A1B0GUA9 196 aa18.39■□□□□ 0.53
RNF40-206ENST00000564260 CARNS1A5YM72 827 aa18.39■□□□□ 0.53
RNF40-206ENST00000564260 MYMKA6NI61 221 aa18.39■□□□□ 0.53
RNF40-206ENST00000564260 CCDC169A6NNP5 214 aa18.39■□□□□ 0.53
RNF40-206ENST00000564260 HOXA11P31270 313 aaPredicted RBP18.39■□□□□ 0.53
RNF40-206ENST00000564260 DEFB103AP81534 67 aa18.39■□□□□ 0.53
RNF40-206ENST00000564260 TWF2Q6IBS0 349 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms