RNA–Protein interactions for RNA: ENST00000563875.1

SNUPN-203, Transcript of snurportin 1, humanhuman

TSL 3

Gene SNUPN, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-203ENST00000563875 ITGB1P05556 798 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 SYT1P21579 422 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 MBTD1Q05BQ5 628 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 CAMK1Q14012 370 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 HYIQ5T013 277 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 UBXN11Q5T124 520 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 ARL6IP4Q66PJ3 421 aaKnown RBP12.54□□□□□ -0.4
SNUPN-203ENST00000563875 CDCA2Q69YH5 1023 aaPredicted RBP12.54□□□□□ -0.4
SNUPN-203ENST00000563875 TWF2Q6IBS0 349 aaKnown RBP12.54□□□□□ -0.4
SNUPN-203ENST00000563875 PADI6Q6TGC4 694 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 LRRC55Q6ZSA7 311 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 BSNDQ8WZ55 320 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 BHMT2Q9H2M3 363 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 FAM105AQ9NUU6 356 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 TYW1Q9NV66 732 aaKnown RBP12.54□□□□□ -0.4
SNUPN-203ENST00000563875 PLAGL2Q9UPG8 496 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 KIAA1024Q9UPX6 916 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 STK24Q9Y6E0 443 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 CUL9Q8IWT3 2517 aa12.54□□□□□ -0.4
SNUPN-203ENST00000563875 VWA3AA6NCI4 1184 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 MEIS3P2A8K0S8 358 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 ZNF623O75123 536 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 CYP11B2P19099 503 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 DNAJB1P25685 340 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 RAB27AP51159 221 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 RESTQ13127 1097 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 TFDP1Q14186 410 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 PCBP1Q15365 356 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNUPN-203ENST00000563875 PTPROQ16827 1216 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 TIGD5Q53EQ6 642 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 NAALADL2Q58DX5 795 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 KRT79Q5XKE5 535 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 MAEAQ7L5Y9 396 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 KCNK18Q7Z418 384 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 KLHL23Q8NBE8 558 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 COLGALT1Q8NBJ5 622 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 RNF169Q8NCN4 708 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 HELQQ8TDG4 1101 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 ATXN2LQ8WWM7 1075 aaKnown RBP12.53□□□□□ -0.4
SNUPN-203ENST00000563875 LPPQ93052 612 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 LMAN2LQ9H0V9 348 aa12.53□□□□□ -0.4
SNUPN-203ENST00000563875 ALG13Q9NP73 1137 aaKnown RBP12.53□□□□□ -0.4
SNUPN-203ENST00000563875 E9PMD0 336 aa12.52□□□□□ -0.41
SNUPN-203ENST00000563875 INO80B-WBP1J3KQ70 363 aa12.52□□□□□ -0.41
SNUPN-203ENST00000563875 ERLIN2O94905 339 aa12.52□□□□□ -0.41
SNUPN-203ENST00000563875 EYA4O95677 639 aa12.52□□□□□ -0.41
SNUPN-203ENST00000563875 SKIP12755 728 aa12.52□□□□□ -0.41
SNUPN-203ENST00000563875 TFF2Q03403 129 aa12.52□□□□□ -0.41
SNUPN-203ENST00000563875 COL19A1Q14993 1142 aa12.52□□□□□ -0.41
SNUPN-203ENST00000563875 MRPL10Q7Z7H8 261 aaKnown RBP12.52□□□□□ -0.41
SNUPN-203ENST00000563875 LRRC43Q8N309 656 aa12.52□□□□□ -0.41
SNUPN-203ENST00000563875 SPPL3Q8TCT6 385 aa12.52□□□□□ -0.41
SNUPN-203ENST00000563875 PNMA5Q96PV4 448 aa12.52□□□□□ -0.41
SNUPN-203ENST00000563875 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.41
SNUPN-203ENST00000563875 MTMR6Q9Y217 621 aa12.52□□□□□ -0.41
SNUPN-203ENST00000563875 PCDHB2Q9Y5E7 798 aa12.52□□□□□ -0.41
SNUPN-203ENST00000563875 MYH11P35749 1972 aa12.52□□□□□ -0.41
SNUPN-203ENST00000563875 TTC28Q96AY4 2481 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 LRRIQ4A6NIV6 560 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 B4GALT5O43286 388 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 BMP15O95972 392 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 ARF4P18085 180 aaPredicted RBP12.51□□□□□ -0.41
SNUPN-203ENST00000563875 LAG3P18627 525 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 AXLP30530 894 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 GRIN1Q05586 938 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 PTPAQ15257 358 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 SF3A1Q15459 793 aaKnown RBP12.51□□□□□ -0.41
SNUPN-203ENST00000563875 SKIV2LQ15477 1246 aaKnown RBP12.51□□□□□ -0.41
SNUPN-203ENST00000563875 LONRF3Q496Y0 759 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 TMEM119Q4V9L6 283 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 TCEAL5Q5H9L2 206 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 NOTUMQ6P988 496 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 PPP4R3CPQ6ZMV5 832 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 AGMOQ6ZNB7 445 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 ABI1Q8IZP0 508 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 DAW1Q8N136 415 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 SMG8Q8ND04 991 aaKnown RBP12.51□□□□□ -0.41
SNUPN-203ENST00000563875 LRRC15Q8TF66 581 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 RSPH1Q8WYR4 309 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 CCDC51Q96ER9 411 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 CPB2Q96IY4 423 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 ASB2Q96Q27 587 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 COL25A1Q9BXS0 654 aaPredicted RBP12.51□□□□□ -0.41
SNUPN-203ENST00000563875 EIF2AQ9BY44 585 aaKnown RBP12.51□□□□□ -0.41
SNUPN-203ENST00000563875 CCDC113Q9H0I3 377 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 NSUN3Q9H649 340 aaKnown RBP12.51□□□□□ -0.41
SNUPN-203ENST00000563875 COG5Q9UP83 839 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 DNM3Q9UQ16 869 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 CLIC4Q9Y696 253 aa12.51□□□□□ -0.41
SNUPN-203ENST00000563875 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.5□□□□□ -0.41
SNUPN-203ENST00000563875 TTLL13PA6NNM8 815 aa12.5□□□□□ -0.41
SNUPN-203ENST00000563875 STX6O43752 255 aa12.5□□□□□ -0.41
SNUPN-203ENST00000563875 OFD1O75665 1012 aa12.5□□□□□ -0.41
SNUPN-203ENST00000563875 FGF18O76093 207 aa12.5□□□□□ -0.41
SNUPN-203ENST00000563875 EDN1P05305 212 aa12.5□□□□□ -0.41
SNUPN-203ENST00000563875 NCLP19338 710 aaKnown RBP12.5□□□□□ -0.41
SNUPN-203ENST00000563875 IRS1P35568 1242 aa12.5□□□□□ -0.41
SNUPN-203ENST00000563875 PBX3P40426 434 aa12.5□□□□□ -0.41
SNUPN-203ENST00000563875 NAMPTP43490 491 aa12.5□□□□□ -0.41
SNUPN-203ENST00000563875 MRPS5P82675 430 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms