RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 KCNK18Q7Z418 384 aa31.39■■■□□ 2.62
NME3-203ENST00000563367 TMEM117Q9H0C3 514 aa31.39■■■□□ 2.62
NME3-203ENST00000563367 POLD4Q9HCU8 107 aa31.39■■■□□ 2.62
NME3-203ENST00000563367 MYH15Q9Y2K3 1946 aa31.38■■■□□ 2.61
NME3-203ENST00000563367 GRM6O15303 877 aa31.38■■■□□ 2.61
NME3-203ENST00000563367 MBTD1Q05BQ5 628 aa31.38■■■□□ 2.61
NME3-203ENST00000563367 LRRC55Q6ZSA7 311 aa31.38■■■□□ 2.61
NME3-203ENST00000563367 BSNDQ8WZ55 320 aa31.38■■■□□ 2.61
NME3-203ENST00000563367 PNMA5Q96PV4 448 aa31.38■■■□□ 2.61
NME3-203ENST00000563367 C11orf84Q9BUA3 381 aaPredicted RBP31.38■■■□□ 2.61
NME3-203ENST00000563367 PLVAPQ9BX97 442 aa31.38■■■□□ 2.61
NME3-203ENST00000563367 FAM105AQ9NUU6 356 aa31.38■■■□□ 2.61
NME3-203ENST00000563367 TYW1Q9NV66 732 aaKnown RBP31.38■■■□□ 2.61
NME3-203ENST00000563367 DNM3Q9UQ16 869 aa31.38■■■□□ 2.61
NME3-203ENST00000563367 INO80B-WBP1J3KQ70 363 aa31.37■■■□□ 2.61
NME3-203ENST00000563367 HOXA2O43364 376 aa31.37■■■□□ 2.61
NME3-203ENST00000563367 STX6O43752 255 aa31.37■■■□□ 2.61
NME3-203ENST00000563367 EYA4O95677 639 aa31.37■■■□□ 2.61
NME3-203ENST00000563367 ZRSR1Q15695 479 aaKnown RBP31.37■■■□□ 2.61
NME3-203ENST00000563367 LONRF3Q496Y0 759 aa31.37■■■□□ 2.61
NME3-203ENST00000563367 LPPQ93052 612 aa31.37■■■□□ 2.61
NME3-203ENST00000563367 MRPL38Q96DV4 380 aaKnown RBP31.37■■■□□ 2.61
NME3-203ENST00000563367 NFKBIZQ9BYH8 718 aa31.37■■■□□ 2.61
NME3-203ENST00000563367 CWH43Q9H720 699 aa31.37■■■□□ 2.61
NME3-203ENST00000563367 CLIC4Q9Y696 253 aa31.37■■■□□ 2.61
NME3-203ENST00000563367 TSPAN1O60635 241 aa31.36■■■□□ 2.61
NME3-203ENST00000563367 ERLIN2O94905 339 aa31.36■■■□□ 2.61
NME3-203ENST00000563367 GRIN1Q05586 938 aa31.36■■■□□ 2.61
NME3-203ENST00000563367 AMHR2Q16671 573 aa31.36■■■□□ 2.61
NME3-203ENST00000563367 HYIQ5T013 277 aa31.36■■■□□ 2.61
NME3-203ENST00000563367 UBXN11Q5T124 520 aa31.36■■■□□ 2.61
NME3-203ENST00000563367 HELQQ8TDG4 1101 aa31.36■■■□□ 2.61
NME3-203ENST00000563367 BRWD1Q9NSI6 2320 aa31.35■■■□□ 2.61
NME3-203ENST00000563367 LRRIQ4A6NIV6 560 aa31.35■■■□□ 2.61
NME3-203ENST00000563367 MEIS3P2A8K0S8 358 aa31.35■■■□□ 2.61
NME3-203ENST00000563367 ZNF623O75123 536 aa31.35■■■□□ 2.61
NME3-203ENST00000563367 BMP15O95972 392 aa31.35■■■□□ 2.61
NME3-203ENST00000563367 PTPROQ16827 1216 aa31.35■■■□□ 2.61
NME3-203ENST00000563367 ABI1Q8IZP0 508 aa31.35■■■□□ 2.61
NME3-203ENST00000563367 KLHL23Q8NBE8 558 aa31.35■■■□□ 2.61
NME3-203ENST00000563367 P2RX5Q93086 422 aa31.35■■■□□ 2.61
NME3-203ENST00000563367 CPB2Q96IY4 423 aa31.35■■■□□ 2.61
NME3-203ENST00000563367 PLIN2Q99541 437 aa31.35■■■□□ 2.61
NME3-203ENST00000563367 ALG13Q9NP73 1137 aaKnown RBP31.35■■■□□ 2.61
NME3-203ENST00000563367 PLAGL2Q9UPG8 496 aa31.35■■■□□ 2.61
NME3-203ENST00000563367 PCDHB2Q9Y5E7 798 aa31.35■■■□□ 2.61
NME3-203ENST00000563367 MYH11P35749 1972 aa31.35■■■□□ 2.61
NME3-203ENST00000563367 SKIP12755 728 aa31.34■■■□□ 2.61
NME3-203ENST00000563367 PTPAQ15257 358 aa31.34■■■□□ 2.61
NME3-203ENST00000563367 PCBP1Q15365 356 aaKnown RBP eCLIP31.34■■■□□ 2.61
NME3-203ENST00000563367 SPOUT1Q5T280 376 aaKnown RBP31.34■■■□□ 2.61
NME3-203ENST00000563367 ITGB1P05556 798 aa31.33■■■□□ 2.61
NME3-203ENST00000563367 RAB27AP51159 221 aa31.33■■■□□ 2.61
NME3-203ENST00000563367 SKIV2LQ15477 1246 aaKnown RBP31.33■■■□□ 2.61
NME3-203ENST00000563367 AK8Q96MA6 479 aa31.33■■■□□ 2.61
NME3-203ENST00000563367 B4GALT5O43286 388 aa31.32■■■□□ 2.6
NME3-203ENST00000563367 DNAJB1P25685 340 aa31.32■■■□□ 2.6
NME3-203ENST00000563367 NAALADL2Q58DX5 795 aa31.32■■■□□ 2.6
NME3-203ENST00000563367 CDCA2Q69YH5 1023 aaPredicted RBP31.32■■■□□ 2.6
NME3-203ENST00000563367 CABP7Q86V35 215 aa31.32■■■□□ 2.6
NME3-203ENST00000563367 COLGALT1Q8NBJ5 622 aa31.32■■■□□ 2.6
NME3-203ENST00000563367 SPPL3Q8TCT6 385 aa31.32■■■□□ 2.6
NME3-203ENST00000563367 RUSC1Q9BVN2 902 aa31.32■■■□□ 2.6
NME3-203ENST00000563367 SPTBN5Q9NRC6 3674 aaKnown RBP31.31■■■□□ 2.6
NME3-203ENST00000563367 ARF4P18085 180 aaPredicted RBP31.31■■■□□ 2.6
NME3-203ENST00000563367 AXLP30530 894 aa31.31■■■□□ 2.6
NME3-203ENST00000563367 CAMK1Q14012 370 aa31.31■■■□□ 2.6
NME3-203ENST00000563367 TMEM119Q4V9L6 283 aa31.31■■■□□ 2.6
NME3-203ENST00000563367 RINT1Q6NUQ1 792 aa31.31■■■□□ 2.6
NME3-203ENST00000563367 MRPL10Q7Z7H8 261 aaKnown RBP31.31■■■□□ 2.6
NME3-203ENST00000563367 LRRC43Q8N309 656 aa31.31■■■□□ 2.6
NME3-203ENST00000563367 EIF2AQ9BY44 585 aaKnown RBP31.31■■■□□ 2.6
NME3-203ENST00000563367 THEGQ9P2T0 379 aa31.31■■■□□ 2.6
NME3-203ENST00000563367 PCDHB12Q9Y5F1 795 aa31.31■■■□□ 2.6
NME3-203ENST00000563367 NAMPTP43490 491 aa31.3■■■□□ 2.6
NME3-203ENST00000563367 CEBPZQ03701 1054 aaKnown RBP31.3■■■□□ 2.6
NME3-203ENST00000563367 NOTUMQ6P988 496 aa31.3■■■□□ 2.6
NME3-203ENST00000563367 C1orf186Q6ZWK4 172 aa31.3■■■□□ 2.6
NME3-203ENST00000563367 KIFAP3Q92845 792 aa31.3■■■□□ 2.6
NME3-203ENST00000563367 NT5C3AQ9H0P0 336 aa31.3■■■□□ 2.6
NME3-203ENST00000563367 LMAN2LQ9H0V9 348 aa31.3■■■□□ 2.6
NME3-203ENST00000563367 ZSCAN16Q9H4T2 348 aaPredicted RBP31.3■■■□□ 2.6
NME3-203ENST00000563367 AAASQ9NRG9 546 aa31.3■■■□□ 2.6
NME3-203ENST00000563367 CSPG5O95196 566 aa31.29■■■□□ 2.6
NME3-203ENST00000563367 MARCKSP29966 332 aaPredicted RBP31.29■■■□□ 2.6
NME3-203ENST00000563367 LONP1P36776 959 aaKnown RBP31.29■■■□□ 2.6
NME3-203ENST00000563367 AGMOQ6ZNB7 445 aa31.29■■■□□ 2.6
NME3-203ENST00000563367 ZBTB8OSQ8IWT0 167 aa31.29■■■□□ 2.6
NME3-203ENST00000563367 DAW1Q8N136 415 aa31.29■■■□□ 2.6
NME3-203ENST00000563367 SMG8Q8ND04 991 aaKnown RBP31.29■■■□□ 2.6
NME3-203ENST00000563367 LRRC15Q8TF66 581 aa31.29■■■□□ 2.6
NME3-203ENST00000563367 CDK5RAP3Q96JB5 506 aa31.29■■■□□ 2.6
NME3-203ENST00000563367 KIFC3Q9BVG8 833 aa31.29■■■□□ 2.6
NME3-203ENST00000563367 FZD8Q9H461 694 aa31.29■■■□□ 2.6
NME3-203ENST00000563367 XIRP2A4UGR9 3374 aa31.28■■■□□ 2.6
NME3-203ENST00000563367 OFD1O75665 1012 aa31.28■■■□□ 2.6
NME3-203ENST00000563367 HSP90AA1P07900 732 aaKnown RBP31.28■■■□□ 2.6
NME3-203ENST00000563367 LAG3P18627 525 aa31.28■■■□□ 2.6
NME3-203ENST00000563367 UBA7P41226 1012 aa31.28■■■□□ 2.6
NME3-203ENST00000563367 NCBP1Q09161 790 aaKnown RBP31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms