RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 CXCL14O95715 111 aa17.62■□□□□ 0.41
CLK3-211ENST00000563297 FDPSP14324 419 aaKnown RBP17.62■□□□□ 0.41
CLK3-211ENST00000563297 HOXB8P17481 243 aaPredicted RBP17.62■□□□□ 0.41
CLK3-211ENST00000563297 AK2P54819 239 aa17.62■□□□□ 0.41
CLK3-211ENST00000563297 SMC1AQ14683 1233 aaKnown RBP17.62■□□□□ 0.41
CLK3-211ENST00000563297 TRIM67Q6ZTA4 783 aa17.62■□□□□ 0.41
CLK3-211ENST00000563297 SLC7A3Q8WY07 619 aa17.62■□□□□ 0.41
CLK3-211ENST00000563297 RSPH1Q8WYR4 309 aa17.62■□□□□ 0.41
CLK3-211ENST00000563297 TMEM143Q96AN5 459 aa17.62■□□□□ 0.41
CLK3-211ENST00000563297 NAP1L4Q99733 375 aaKnown RBP17.62■□□□□ 0.41
CLK3-211ENST00000563297 APOL5Q9BWW9 433 aa17.62■□□□□ 0.41
CLK3-211ENST00000563297 NRDE2Q9H7Z3 1164 aa17.62■□□□□ 0.41
CLK3-211ENST00000563297 PPME1Q9Y570 386 aa17.62■□□□□ 0.41
CLK3-211ENST00000563297 COL4A3BPQ9Y5P4 624 aa17.62■□□□□ 0.41
CLK3-211ENST00000563297 PIEZO1Q92508 2521 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 FAM205CA6NFA0 338 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 ZBTB39O15060 712 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 MARCH6O60337 910 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 CLASP2O75122 1294 aaKnown RBP17.61■□□□□ 0.41
CLK3-211ENST00000563297 ZC3H11AO75152 810 aaKnown RBP eCLIP17.61■□□□□ 0.41
CLK3-211ENST00000563297 SRGAP2CP0DJJ0 459 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 POLGP54098 1239 aaPredicted RBP17.61■□□□□ 0.41
CLK3-211ENST00000563297 ANAPC15P60006 121 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 ZXDAP98168 799 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 SPIRE1Q08AE8 756 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 NR5A1Q13285 461 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 ANKRD1Q15327 319 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 NOMO2Q5JPE7 1267 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 BMP8AQ7Z5Y6 402 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 TMEM173Q86WV6 379 aaPredicted RBP17.61■□□□□ 0.41
CLK3-211ENST00000563297 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 EXOC8Q8IYI6 725 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 TMEM169Q96HH4 297 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 MFSD14AQ96MC6 490 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 FBXL18Q96ME1 805 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 KCNH6Q9H252 994 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 MINDY3Q9H8M7 445 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 TBC1D13Q9NVG8 400 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 HCFC2Q9Y5Z7 792 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 WDFY4Q6ZS81 3184 aa17.61■□□□□ 0.41
CLK3-211ENST00000563297 BAG4O95429 457 aaKnown RBP17.6■□□□□ 0.41
CLK3-211ENST00000563297 GALTP07902 379 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 HOXA11P31270 313 aaPredicted RBP17.6■□□□□ 0.41
CLK3-211ENST00000563297 YWHABP31946 246 aaKnown RBP17.6■□□□□ 0.41
CLK3-211ENST00000563297 RFC5P40937 340 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 RAB27AP51159 221 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 LAMTOR4Q0VGL1 99 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 NCAPH2Q6IBW4 605 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 GLB1LQ6UWU2 654 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 OTUD6AQ7L8S5 288 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 SRGAP1Q7Z6B7 1085 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 MRPL10Q7Z7H8 261 aaKnown RBP17.6■□□□□ 0.41
CLK3-211ENST00000563297 DDX53Q86TM3 631 aaKnown RBP17.6■□□□□ 0.41
CLK3-211ENST00000563297 VPS52Q8N1B4 723 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 NECAB1Q8N987 351 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 PSPC1Q8WXF1 523 aaKnown RBP17.6■□□□□ 0.41
CLK3-211ENST00000563297 WASF1Q92558 559 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 CASP10Q92851 521 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 TNFRSF25Q93038 417 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 PGBD4Q96DM1 585 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 IGSF21Q96ID5 467 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 DYDC2Q96IM9 177 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 LXNQ9BS40 222 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 AGPAT5Q9NUQ2 364 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 INPP5FQ9Y2H2 1132 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 PCDHB2Q9Y5E7 798 aa17.6■□□□□ 0.41
CLK3-211ENST00000563297 TMEM221A6NGB7 291 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 M0R296 226 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 ASAP2O43150 1006 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 SLITRK3O94933 977 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 RNASELQ05823 741 aaKnown RBP17.59■□□□□ 0.41
CLK3-211ENST00000563297 CTTNQ14247 550 aaKnown RBP17.59■□□□□ 0.41
CLK3-211ENST00000563297 BMS1Q14692 1282 aaKnown RBP17.59■□□□□ 0.41
CLK3-211ENST00000563297 ME3Q16798 604 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 XKR9Q5GH70 373 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 AGMOQ6ZNB7 445 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 ZNF280BQ86YH2 543 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 SLFN12Q8IYM2 578 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 BCL7CQ8WUZ0 217 aaPredicted RBP17.59■□□□□ 0.41
CLK3-211ENST00000563297 AUTS2Q8WXX7 1259 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 ZBP1Q9H171 429 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 ZSWIM4Q9H7M6 989 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 BMP2KQ9NSY1 1161 aaPredicted RBP17.59■□□□□ 0.41
CLK3-211ENST00000563297 DNAJB4Q9UDY4 337 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 CDH22Q9UJ99 828 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 IRAK3Q9Y616 596 aa17.59■□□□□ 0.41
CLK3-211ENST00000563297 ZDBF2Q9HCK1 2354 aa17.58■□□□□ 0.41
CLK3-211ENST00000563297 CARNS1A5YM72 827 aa17.58■□□□□ 0.4
CLK3-211ENST00000563297 GAS2O43903 313 aaKnown RBP17.58■□□□□ 0.4
CLK3-211ENST00000563297 CTSAP10619 480 aa17.58■□□□□ 0.4
CLK3-211ENST00000563297 KRT2P35908 639 aa17.58■□□□□ 0.4
CLK3-211ENST00000563297 AFF1P51825 1210 aaKnown RBP17.58■□□□□ 0.4
CLK3-211ENST00000563297 CYP4A11Q02928 519 aa17.58■□□□□ 0.4
CLK3-211ENST00000563297 TPRNQ4KMQ1 711 aa17.58■□□□□ 0.4
CLK3-211ENST00000563297 UBXN11Q5T124 520 aa17.58■□□□□ 0.4
CLK3-211ENST00000563297 FERMT3Q86UX7 667 aa17.58■□□□□ 0.4
CLK3-211ENST00000563297 TPH2Q8IWU9 490 aa17.58■□□□□ 0.4
CLK3-211ENST00000563297 TCP11Q8WWU5 503 aa17.58■□□□□ 0.4
CLK3-211ENST00000563297 PBXIP1Q96AQ6 731 aa17.58■□□□□ 0.4
CLK3-211ENST00000563297 ADAM7Q9H2U9 754 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms