RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 LRFN2Q9ULH4 789 aa20.71■□□□□ 0.91
CDH11-206ENST00000562998 PIN4Q9Y237 131 aaKnown RBP20.71■□□□□ 0.91
CDH11-206ENST00000562998 PRUNE2Q8WUY3 3088 aa20.7■□□□□ 0.9
CDH11-206ENST00000562998 TSPAN1O60635 241 aa20.7■□□□□ 0.9
CDH11-206ENST00000562998 F13A1P00488 732 aa20.7■□□□□ 0.9
CDH11-206ENST00000562998 MARCKSP29966 332 aaPredicted RBP20.7■□□□□ 0.9
CDH11-206ENST00000562998 SLC12A3P55017 1021 aa20.7■□□□□ 0.9
CDH11-206ENST00000562998 MAPK7Q13164 816 aa20.7■□□□□ 0.9
CDH11-206ENST00000562998 BTG3Q14201 252 aaPredicted RBP20.7■□□□□ 0.9
CDH11-206ENST00000562998 UBXN11Q5T124 520 aa20.7■□□□□ 0.9
CDH11-206ENST00000562998 TMEM192Q8IY95 271 aa20.7■□□□□ 0.9
CDH11-206ENST00000562998 SPRYD3Q8NCJ5 442 aa20.7■□□□□ 0.9
CDH11-206ENST00000562998 LINC00301Q8NCQ3 95 aa20.7■□□□□ 0.9
CDH11-206ENST00000562998 KIFAP3Q92845 792 aa20.7■□□□□ 0.9
CDH11-206ENST00000562998 RUSC1Q9BVN2 902 aa20.7■□□□□ 0.9
CDH11-206ENST00000562998 CSRNP2Q9H175 543 aa20.7■□□□□ 0.9
CDH11-206ENST00000562998 KIAA1671Q9BY89 1806 aa20.69■□□□□ 0.9
CDH11-206ENST00000562998 FGFR1P11362 822 aa20.69■□□□□ 0.9
CDH11-206ENST00000562998 GUCY2CP25092 1073 aa20.69■□□□□ 0.9
CDH11-206ENST00000562998 AXLP30530 894 aa20.69■□□□□ 0.9
CDH11-206ENST00000562998 BMPR1AP36894 532 aa20.69■□□□□ 0.9
CDH11-206ENST00000562998 UBA7P41226 1012 aa20.69■□□□□ 0.9
CDH11-206ENST00000562998 NAMPTP43490 491 aa20.69■□□□□ 0.9
CDH11-206ENST00000562998 CEBPZQ03701 1054 aaKnown RBP20.69■□□□□ 0.9
CDH11-206ENST00000562998 PPP4R3CPQ6ZMV5 832 aa20.69■□□□□ 0.9
CDH11-206ENST00000562998 USP49Q70CQ1 688 aa20.69■□□□□ 0.9
CDH11-206ENST00000562998 CASD1Q96PB1 797 aa20.69■□□□□ 0.9
CDH11-206ENST00000562998 FZD8Q9H461 694 aa20.69■□□□□ 0.9
CDH11-206ENST00000562998 BLOC1S4Q9NUP1 217 aa20.69■□□□□ 0.9
CDH11-206ENST00000562998 MTCH2Q9Y6C9 303 aa20.69■□□□□ 0.9
CDH11-206ENST00000562998 MRPL42Q9Y6G3 142 aaKnown RBP20.69■□□□□ 0.9
CDH11-206ENST00000562998 FAM187BQ17R55 369 aa20.68■□□□□ 0.9
CDH11-206ENST00000562998 CLLU1OSQ5K130 101 aa20.68■□□□□ 0.9
CDH11-206ENST00000562998 TWF2Q6IBS0 349 aaKnown RBP20.68■□□□□ 0.9
CDH11-206ENST00000562998 MRPL10Q7Z7H8 261 aaKnown RBP20.68■□□□□ 0.9
CDH11-206ENST00000562998 FBXO22Q8NEZ5 403 aa20.68■□□□□ 0.9
CDH11-206ENST00000562998 MAFAQ8NHW3 353 aaPredicted RBP20.68■□□□□ 0.9
CDH11-206ENST00000562998 EPSTI1Q96J88 318 aa20.68■□□□□ 0.9
CDH11-206ENST00000562998 PLIN2Q99541 437 aa20.68■□□□□ 0.9
CDH11-206ENST00000562998 TIPINQ9BVW5 301 aa20.68■□□□□ 0.9
CDH11-206ENST00000562998 TMEM117Q9H0C3 514 aa20.68■□□□□ 0.9
CDH11-206ENST00000562998 CCDC113Q9H0I3 377 aa20.68■□□□□ 0.9
CDH11-206ENST00000562998 POLD4Q9HCU8 107 aa20.68■□□□□ 0.9
CDH11-206ENST00000562998 FAM105AQ9NUU6 356 aa20.68■□□□□ 0.9
CDH11-206ENST00000562998 LMCD1Q9NZU5 365 aa20.68■□□□□ 0.9
CDH11-206ENST00000562998 MTUS1Q9ULD2 1270 aa20.68■□□□□ 0.9
CDH11-206ENST00000562998 ZDHHC9Q9Y397 364 aa20.68■□□□□ 0.9
CDH11-206ENST00000562998 RWDD3Q9Y3V2 267 aa20.68■□□□□ 0.9
CDH11-206ENST00000562998 LRRIQ4A6NIV6 560 aa20.67■□□□□ 0.9
CDH11-206ENST00000562998 H3BNC9 293 aa20.67■□□□□ 0.9
CDH11-206ENST00000562998 INO80B-WBP1J3KQ70 363 aa20.67■□□□□ 0.9
CDH11-206ENST00000562998 HOXA2O43364 376 aa20.67■□□□□ 0.9
CDH11-206ENST00000562998 RB1P06400 928 aa20.67■□□□□ 0.9
CDH11-206ENST00000562998 PLA2G4BP0C869 781 aa20.67■□□□□ 0.9
CDH11-206ENST00000562998 SKIP12755 728 aa20.67■□□□□ 0.9
CDH11-206ENST00000562998 RAB27AP51159 221 aa20.67■□□□□ 0.9
CDH11-206ENST00000562998 KARSQ15046 597 aaKnown RBP20.67■□□□□ 0.9
CDH11-206ENST00000562998 PPP2R5AQ15172 486 aa20.67■□□□□ 0.9
CDH11-206ENST00000562998 ZRSR1Q15695 479 aaKnown RBP20.67■□□□□ 0.9
CDH11-206ENST00000562998 ARSHQ5FYA8 562 aa20.67■□□□□ 0.9
CDH11-206ENST00000562998 GDPD5Q8WTR4 605 aa20.67■□□□□ 0.9
CDH11-206ENST00000562998 CALML4Q96GE6 196 aa20.67■□□□□ 0.9
CDH11-206ENST00000562998 ZNF396Q96N95 335 aaPredicted RBP20.67■□□□□ 0.9
CDH11-206ENST00000562998 CLIC6Q96NY7 704 aa20.67■□□□□ 0.9
CDH11-206ENST00000562998 KCND2Q9NZV8 630 aa20.67■□□□□ 0.9
CDH11-206ENST00000562998 PRRC2BQ5JSZ5 2229 aaKnown RBP20.66■□□□□ 0.9
CDH11-206ENST00000562998 TBKBP1A7MCY6 615 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 B4GALT5O43286 388 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 HIP1RO75146 1068 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 PPP6R2O75170 966 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 ERLIN2O94905 339 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 YEATS4O95619 227 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 BRD1O95696 1058 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 ARF4P18085 180 aaPredicted RBP20.66■□□□□ 0.9
CDH11-206ENST00000562998 PLCG1P19174 1290 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 PAN2Q504Q3 1202 aaKnown RBP20.66■□□□□ 0.9
CDH11-206ENST00000562998 SPECC1Q5M775 1068 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 LRRC55Q6ZSA7 311 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 KRI1Q8N9T8 703 aaKnown RBP20.66■□□□□ 0.9
CDH11-206ENST00000562998 CCDC51Q96ER9 411 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 CDK5RAP3Q96JB5 506 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 PRIMPOLQ96LW4 560 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 PLVAPQ9BX97 442 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 C2orf40Q9H1Z8 148 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 CWH43Q9H720 699 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 C17orf75Q9HAS0 396 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 TFIP11Q9UBB9 837 aaKnown RBP20.66■□□□□ 0.9
CDH11-206ENST00000562998 PCDHB2Q9Y5E7 798 aa20.66■□□□□ 0.9
CDH11-206ENST00000562998 A0A1B0GUA9 196 aa20.65■□□□□ 0.9
CDH11-206ENST00000562998 MEIS3P2A8K0S8 358 aa20.65■□□□□ 0.9
CDH11-206ENST00000562998 FOXD4L5Q5VV16 416 aaPredicted RBP20.65■□□□□ 0.9
CDH11-206ENST00000562998 ATL3Q6DD88 541 aa20.65■□□□□ 0.9
CDH11-206ENST00000562998 NOTUMQ6P988 496 aa20.65■□□□□ 0.9
CDH11-206ENST00000562998 SMG8Q8ND04 991 aaKnown RBP20.65■□□□□ 0.9
CDH11-206ENST00000562998 FOXD4L4Q8WXT5 416 aaPredicted RBP20.65■□□□□ 0.9
CDH11-206ENST00000562998 RSPH1Q8WYR4 309 aa20.65■□□□□ 0.9
CDH11-206ENST00000562998 SYMPKQ92797 1274 aaKnown RBP20.65■□□□□ 0.9
CDH11-206ENST00000562998 P2RX5Q93086 422 aa20.65■□□□□ 0.9
CDH11-206ENST00000562998 NTPCRQ9BSD7 190 aaKnown RBP20.65■□□□□ 0.9
CDH11-206ENST00000562998 PRMT7Q9NVM4 692 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms