RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ADOQ96SZ5 270 aa6.35□□□□□ -1.39
SMG1-206ENST00000562668 DPYSL5Q9BPU6 564 aa6.35□□□□□ -1.39
SMG1-206ENST00000562668 AMNQ9BXJ7 453 aa6.35□□□□□ -1.39
SMG1-206ENST00000562668 COQ6Q9Y2Z9 468 aa6.35□□□□□ -1.39
SMG1-206ENST00000562668 SLC30A1Q9Y6M5 507 aa6.35□□□□□ -1.39
SMG1-206ENST00000562668 AHDC1Q5TGY3 1603 aaPredicted RBP6.35□□□□□ -1.39
SMG1-206ENST00000562668 ATP7BP35670 1465 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 SCDO00767 359 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 FZD7O75084 574 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 ECE1P42892 770 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 DUSP8Q13202 625 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 EIF4HQ15056 248 aaKnown RBP6.34□□□□□ -1.39
SMG1-206ENST00000562668 AGBL4Q5VU57 503 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 LRSAM1Q6UWE0 723 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 LARP4Q71RC2 724 aaKnown RBP eCLIP6.34□□□□□ -1.39
SMG1-206ENST00000562668 OTOP2Q7RTS6 562 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 POLNQ7Z5Q5 900 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 SLC7A14Q8TBB6 771 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 FBXO41Q8TF61 875 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 ASB15Q8WXK1 588 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 SORCS2Q96PQ0 1159 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 TESK2Q96S53 571 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 OR10A5Q9H207 317 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 MSL2Q9HCI7 577 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 KCNH7Q9NS40 1196 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 UCKL1Q9NWZ5 548 aa6.34□□□□□ -1.39
SMG1-206ENST00000562668 COL16A1Q07092 1604 aaPredicted RBP6.34□□□□□ -1.39
SMG1-206ENST00000562668 KIF1AQ12756 1690 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 CENPJQ9HC77 1338 aaPredicted RBP6.33□□□□□ -1.4
SMG1-206ENST00000562668 MATN2O00339 956 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 CYR61O00622 381 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 CDC14BO60729 498 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 AMHP03971 560 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 ACVRL1P37023 503 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 RBL2Q08999 1139 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 TBR1Q16650 682 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 TMEM200BQ69YZ2 307 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 USP51Q70EK9 711 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 BRAPQ7Z569 592 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 JMYQ8N9B5 988 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 ZSWIM2Q8NEG5 633 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 WDR48Q8TAF3 677 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 EDAQ92838 391 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 MAGEB10Q96LZ2 347 aaPredicted RBP6.33□□□□□ -1.4
SMG1-206ENST00000562668 OR14A2Q96R54 314 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 SRPK1Q96SB4 655 aaKnown RBP6.33□□□□□ -1.4
SMG1-206ENST00000562668 DNAJC7Q99615 494 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 MRPL4Q9BYD3 311 aaKnown RBP6.33□□□□□ -1.4
SMG1-206ENST00000562668 ITSN1Q15811 1721 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 ANKARQ7Z5J8 1434 aa6.33□□□□□ -1.4
SMG1-206ENST00000562668 USP47Q96K76 1375 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 A0A0G2JNJ9 132 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 FOXP2O15409 715 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 TOM1O60784 492 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 SLPIP03973 132 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 CD83Q01151 205 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 SAFB2Q14151 953 aaKnown RBP eCLIP6.32□□□□□ -1.4
SMG1-206ENST00000562668 NOLC1Q14978 699 aaKnown RBP eCLIP6.32□□□□□ -1.4
SMG1-206ENST00000562668 RNF207Q6ZRF8 634 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 BRINP3Q76B58 766 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 OVCH1Q7RTY7 1134 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 HIPK4Q8NE63 616 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 CFHR4Q92496 578 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 MKL1Q969V6 931 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 SCLYQ96I15 445 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 PLA2G12BQ9BX93 195 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 POGKQ9P215 609 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 Q9UFV3 132 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 PUF60Q9UHX1 559 aaKnown RBP6.32□□□□□ -1.4
SMG1-206ENST00000562668 CDC42EP3Q9UKI2 254 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 B3GALT1Q9Y5Z6 326 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 PHLPP1O60346 1717 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 TRPM3Q9HCF6 1732 aaPredicted RBP6.32□□□□□ -1.4
SMG1-206ENST00000562668 PXDNQ92626 1479 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 MYOM1P52179 1685 aa6.32□□□□□ -1.4
SMG1-206ENST00000562668 ST20-MTHFSA0A0A6YYL1 179 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 SLC12A8A0AV02 714 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 RASSF10A6NK89 507 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 HIP1RO75146 1068 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 ATF3P18847 181 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 SDHAP31040 664 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 MEOX1P50221 254 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 PCOLCEQ15113 449 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 TRIM68Q6AZZ1 485 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 USP30Q70CQ3 517 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 FILIP1Q7Z7B0 1213 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 RTKN2Q8IZC4 609 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 THAP3Q8WTV1 239 aaPredicted RBP6.31□□□□□ -1.4
SMG1-206ENST00000562668 DLG3Q92796 817 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 GBP4Q96PP9 640 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 ORAI2Q96SN7 254 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 OR10A2Q9H208 303 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 C12orf65Q9H3J6 166 aaKnown RBP6.31□□□□□ -1.4
SMG1-206ENST00000562668 PODXL2Q9NZ53 605 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 ASB1Q9Y576 335 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 AKAP12Q02952 1782 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 EIF3AQ14152 1382 aaKnown RBP6.31□□□□□ -1.4
SMG1-206ENST00000562668 DISP3Q9P2K9 1392 aa6.31□□□□□ -1.4
SMG1-206ENST00000562668 CRYBG1Q9Y4K1 1723 aa6.3□□□□□ -1.4
SMG1-206ENST00000562668 ALS2Q96Q42 1657 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms