RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 MBTD1Q05BQ5 628 aa21.46■■□□□ 1.03
TMEM249-202ENST00000562477 TFDP1Q14186 410 aa21.46■■□□□ 1.03
TMEM249-202ENST00000562477 SF3A1Q15459 793 aaKnown RBP21.46■■□□□ 1.03
TMEM249-202ENST00000562477 SKIV2LQ15477 1246 aaKnown RBP21.46■■□□□ 1.03
TMEM249-202ENST00000562477 LRRC55Q6ZSA7 311 aa21.46■■□□□ 1.03
TMEM249-202ENST00000562477 IFNLR1Q8IU57 520 aaPredicted RBP21.46■■□□□ 1.03
TMEM249-202ENST00000562477 HELQQ8TDG4 1101 aa21.46■■□□□ 1.03
TMEM249-202ENST00000562477 PNMA5Q96PV4 448 aa21.46■■□□□ 1.03
TMEM249-202ENST00000562477 TMEM117Q9H0C3 514 aa21.46■■□□□ 1.03
TMEM249-202ENST00000562477 FAM105AQ9NUU6 356 aa21.46■■□□□ 1.03
TMEM249-202ENST00000562477 RNF216Q9NWF9 866 aaPredicted RBP21.46■■□□□ 1.03
TMEM249-202ENST00000562477 LMCD1Q9NZU5 365 aa21.46■■□□□ 1.03
TMEM249-202ENST00000562477 RWDD3Q9Y3V2 267 aa21.46■■□□□ 1.03
TMEM249-202ENST00000562477 CLIC4Q9Y696 253 aa21.46■■□□□ 1.03
TMEM249-202ENST00000562477 RALGAPA2Q2PPJ7 1873 aa21.45■■□□□ 1.02
TMEM249-202ENST00000562477 LRRIQ4A6NIV6 560 aa21.45■■□□□ 1.02
TMEM249-202ENST00000562477 TSPAN1O60635 241 aa21.45■■□□□ 1.02
TMEM249-202ENST00000562477 RB1P06400 928 aa21.45■■□□□ 1.02
TMEM249-202ENST00000562477 AMHR2Q16671 573 aa21.45■■□□□ 1.02
TMEM249-202ENST00000562477 UBXN11Q5T124 520 aa21.45■■□□□ 1.02
TMEM249-202ENST00000562477 SPOUT1Q5T280 376 aaKnown RBP21.45■■□□□ 1.02
TMEM249-202ENST00000562477 ARL6IP4Q66PJ3 421 aaKnown RBP21.45■■□□□ 1.02
TMEM249-202ENST00000562477 MRPL38Q96DV4 380 aaKnown RBP21.45■■□□□ 1.02
TMEM249-202ENST00000562477 CPB2Q96IY4 423 aa21.45■■□□□ 1.02
TMEM249-202ENST00000562477 C11orf84Q9BUA3 381 aaPredicted RBP21.45■■□□□ 1.02
TMEM249-202ENST00000562477 TRAIPQ9BWF2 469 aa21.45■■□□□ 1.02
TMEM249-202ENST00000562477 CWH43Q9H720 699 aa21.45■■□□□ 1.02
TMEM249-202ENST00000562477 ALG13Q9NP73 1137 aaKnown RBP21.45■■□□□ 1.02
TMEM249-202ENST00000562477 STK24Q9Y6E0 443 aa21.45■■□□□ 1.02
TMEM249-202ENST00000562477 KIAA1671Q9BY89 1806 aa21.45■■□□□ 1.02
TMEM249-202ENST00000562477 B4GALT5O43286 388 aa21.44■■□□□ 1.02
TMEM249-202ENST00000562477 EYA4O95677 639 aa21.44■■□□□ 1.02
TMEM249-202ENST00000562477 ITGB1P05556 798 aa21.44■■□□□ 1.02
TMEM249-202ENST00000562477 POU5F1BQ06416 359 aa21.44■■□□□ 1.02
TMEM249-202ENST00000562477 KLHL23Q8NBE8 558 aa21.44■■□□□ 1.02
TMEM249-202ENST00000562477 RUSC1Q9BVN2 902 aa21.44■■□□□ 1.02
TMEM249-202ENST00000562477 PLVAPQ9BX97 442 aa21.44■■□□□ 1.02
TMEM249-202ENST00000562477 PLAGL2Q9UPG8 496 aa21.44■■□□□ 1.02
TMEM249-202ENST00000562477 DNM3Q9UQ16 869 aa21.44■■□□□ 1.02
TMEM249-202ENST00000562477 PCDHB2Q9Y5E7 798 aa21.44■■□□□ 1.02
TMEM249-202ENST00000562477 HOXA2O43364 376 aa21.43■■□□□ 1.02
TMEM249-202ENST00000562477 STX6O43752 255 aa21.43■■□□□ 1.02
TMEM249-202ENST00000562477 ERLIN2O94905 339 aa21.43■■□□□ 1.02
TMEM249-202ENST00000562477 EOMESO95936 686 aa21.43■■□□□ 1.02
TMEM249-202ENST00000562477 DNAJB1P25685 340 aa21.43■■□□□ 1.02
TMEM249-202ENST00000562477 PBX3P40426 434 aa21.43■■□□□ 1.02
TMEM249-202ENST00000562477 PTPAQ15257 358 aa21.43■■□□□ 1.02
TMEM249-202ENST00000562477 PTPROQ16827 1216 aa21.43■■□□□ 1.02
TMEM249-202ENST00000562477 ABI1Q8IZP0 508 aa21.43■■□□□ 1.02
TMEM249-202ENST00000562477 COLGALT1Q8NBJ5 622 aa21.43■■□□□ 1.02
TMEM249-202ENST00000562477 KIFC3Q9BVG8 833 aa21.43■■□□□ 1.02
TMEM249-202ENST00000562477 EIF2AQ9BY44 585 aaKnown RBP21.43■■□□□ 1.02
TMEM249-202ENST00000562477 TTC28Q96AY4 2481 aa21.43■■□□□ 1.02
TMEM249-202ENST00000562477 CUL9Q8IWT3 2517 aa21.43■■□□□ 1.02
TMEM249-202ENST00000562477 XIRP2A4UGR9 3374 aa21.42■■□□□ 1.02
TMEM249-202ENST00000562477 CEBPZQ03701 1054 aaKnown RBP21.42■■□□□ 1.02
TMEM249-202ENST00000562477 CAMK1Q14012 370 aa21.42■■□□□ 1.02
TMEM249-202ENST00000562477 TMEM119Q4V9L6 283 aa21.42■■□□□ 1.02
TMEM249-202ENST00000562477 HYIQ5T013 277 aa21.42■■□□□ 1.02
TMEM249-202ENST00000562477 CDCA2Q69YH5 1023 aaPredicted RBP21.42■■□□□ 1.02
TMEM249-202ENST00000562477 CABP7Q86V35 215 aa21.42■■□□□ 1.02
TMEM249-202ENST00000562477 CDR2LQ86X02 465 aaPredicted RBP21.42■■□□□ 1.02
TMEM249-202ENST00000562477 SPRYD3Q8NCJ5 442 aa21.42■■□□□ 1.02
TMEM249-202ENST00000562477 SPPL3Q8TCT6 385 aa21.42■■□□□ 1.02
TMEM249-202ENST00000562477 LRRC15Q8TF66 581 aa21.42■■□□□ 1.02
TMEM249-202ENST00000562477 NFKBIZQ9BYH8 718 aa21.42■■□□□ 1.02
TMEM249-202ENST00000562477 THEGQ9P2T0 379 aa21.42■■□□□ 1.02
TMEM249-202ENST00000562477 TTLL13PA6NNM8 815 aa21.41■■□□□ 1.02
TMEM249-202ENST00000562477 ZNF623O75123 536 aa21.41■■□□□ 1.02
TMEM249-202ENST00000562477 BMP15O95972 392 aa21.41■■□□□ 1.02
TMEM249-202ENST00000562477 ARF4P18085 180 aaPredicted RBP21.41■■□□□ 1.02
TMEM249-202ENST00000562477 MARCKSP29966 332 aaPredicted RBP21.41■■□□□ 1.02
TMEM249-202ENST00000562477 RAB27AP51159 221 aa21.41■■□□□ 1.02
TMEM249-202ENST00000562477 TFF2Q03403 129 aa21.41■■□□□ 1.02
TMEM249-202ENST00000562477 TCEAL5Q5H9L2 206 aa21.41■■□□□ 1.02
TMEM249-202ENST00000562477 FOXD4L5Q5VV16 416 aaPredicted RBP21.41■■□□□ 1.02
TMEM249-202ENST00000562477 DAW1Q8N136 415 aa21.41■■□□□ 1.02
TMEM249-202ENST00000562477 LRRC43Q8N309 656 aa21.41■■□□□ 1.02
TMEM249-202ENST00000562477 FOXD4L4Q8WXT5 416 aaPredicted RBP21.41■■□□□ 1.02
TMEM249-202ENST00000562477 P2RX5Q93086 422 aa21.41■■□□□ 1.02
TMEM249-202ENST00000562477 INPP5FQ9Y2H2 1132 aa21.41■■□□□ 1.02
TMEM249-202ENST00000562477 USP20Q9Y2K6 914 aa21.41■■□□□ 1.02
TMEM249-202ENST00000562477 HIP1RO75146 1068 aa21.4■■□□□ 1.02
TMEM249-202ENST00000562477 SSBP05455 408 aaKnown RBP eCLIP21.4■■□□□ 1.02
TMEM249-202ENST00000562477 SKIP12755 728 aa21.4■■□□□ 1.02
TMEM249-202ENST00000562477 AFF1P51825 1210 aaKnown RBP21.4■■□□□ 1.02
TMEM249-202ENST00000562477 RINT1Q6NUQ1 792 aa21.4■■□□□ 1.02
TMEM249-202ENST00000562477 AGMOQ6ZNB7 445 aa21.4■■□□□ 1.02
TMEM249-202ENST00000562477 C1orf186Q6ZWK4 172 aa21.4■■□□□ 1.02
TMEM249-202ENST00000562477 MRPL10Q7Z7H8 261 aaKnown RBP21.4■■□□□ 1.02
TMEM249-202ENST00000562477 SMG8Q8ND04 991 aaKnown RBP21.4■■□□□ 1.02
TMEM249-202ENST00000562477 PCDHB12Q9Y5F1 795 aa21.4■■□□□ 1.02
TMEM249-202ENST00000562477 PCDHGC5Q9Y5F6 944 aa21.4■■□□□ 1.02
TMEM249-202ENST00000562477 OFD1O75665 1012 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 EDN1P05305 212 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 LAG3P18627 525 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 LIG1P18858 919 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 IRS1P35568 1242 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 RAD51AP2Q09MP3 1159 aa21.39■■□□□ 1.01
TMEM249-202ENST00000562477 MAPK7Q13164 816 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms