RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 PHKA2P46019 1235 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 NRIP1P48552 1158 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 ERVFC1P60507 584 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 CAPSQ13938 189 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 IL17AQ16552 155 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 AAK1Q2M2I8 961 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 PLPP4Q5VZY2 271 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 ZNF598Q86UK7 904 aaKnown RBP10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 C4orf32Q8N8J7 132 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 NEK9Q8TD19 979 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 PLVAPQ9BX97 442 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 EIF2AQ9BY44 585 aaKnown RBP10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 ELAC1Q9H777 363 aaKnown RBP10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 ANKEF1Q9NU02 776 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 FAM105AQ9NUU6 356 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 DACT1Q9NYF0 836 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 ARHGEF35A5YM69 484 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 LRRIQ4A6NIV6 560 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 TNFRSF10AO00220 468 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 ZC3H11AO75152 810 aaKnown RBP eCLIP10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 ERLIN2O94905 339 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 LYPLA2O95372 231 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 POMCP01189 267 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 U2AF2P26368 475 aaKnown RBP eCLIP10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 ARL2P36404 184 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 AFF1P51825 1210 aaKnown RBP10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 UBXN11Q5T124 520 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 LARP1BQ659C4 914 aaKnown RBP10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 PTCRAQ6ISU1 281 aaPredicted RBP10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 PADI6Q6TGC4 694 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 KCNT2Q6UVM3 1135 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 SRGAP1Q7Z6B7 1085 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 LRRC43Q8N309 656 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 ERMNQ8TAM6 284 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 SNX29Q8TEQ0 813 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 BSNDQ8WZ55 320 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 ZNF558Q96NG5 402 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 APOL5Q9BWW9 433 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 LMAN2LQ9H0V9 348 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 RNF39Q9H2S5 420 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 TUFT1Q9NNX1 390 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 AAASQ9NRG9 546 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 AGPAT5Q9NUQ2 364 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 LRWD1Q9UFC0 647 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 KIAA1024Q9UPX6 916 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 HES2Q9Y543 173 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 PCDHB2Q9Y5E7 798 aa10.53□□□□□ -0.72
NSMCE1-203ENST00000562039 VPS37CA5D8V6 355 aaPredicted RBP10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 E9PMD0 336 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 HOXA2O43364 376 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 B4GALT3O60512 393 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 TSPAN1O60635 241 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 DGAT1O75907 488 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 LAG3P18627 525 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 HOXA11P31270 313 aaPredicted RBP10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 PTENP60484 403 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 CDC42EP1Q00587 391 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 RNASELQ05823 741 aaKnown RBP10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 MBTD1Q05BQ5 628 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 TMEM132AQ24JP5 1023 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 LLGL2Q6P1M3 1020 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 TMEM173Q86WV6 379 aaPredicted RBP10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 AUTS2Q8WXX7 1259 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 P2RX5Q93086 422 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 PABPC5Q96DU9 382 aaKnown RBP10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 NACC1Q96RE7 527 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 POLR3CQ9BUI4 534 aaPredicted RBP10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 KIFC3Q9BVG8 833 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 BACH2Q9BYV9 841 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 BHMT2Q9H2M3 363 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 TLE6Q9H808 572 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 ENTPD7Q9NQZ7 604 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 CHST12Q9NRB3 414 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 DDX19AQ9NUU7 478 aaKnown RBP10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 DNAJB4Q9UDY4 337 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 BARX2Q9UMQ3 279 aaPredicted RBP10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 KIF3AQ9Y496 699 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 GTF3C3Q9Y5Q9 886 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 XIRP2A4UGR9 3374 aa10.52□□□□□ -0.73
NSMCE1-203ENST00000562039 NCOR1O75376 2440 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 TTLL13PA6NNM8 815 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 HIDE1A8MVS5 230 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 ASAP2O43150 1006 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 TBX10O75333 385 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 OFD1O75665 1012 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 NPTXRO95502 500 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 EOMESO95936 686 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 SSBP05455 408 aaKnown RBP eCLIP10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 RPA1P27694 616 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 LTBRP36941 435 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 TRAPPC10P48553 1259 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 NDUFV1P49821 464 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 BCAR1P56945 870 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 TFDP1Q14186 410 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 MXD4Q14582 209 aaPredicted RBP10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 LEXMQ3ZCV2 418 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 NOMO2Q5JPE7 1267 aa10.51□□□□□ -0.73
NSMCE1-203ENST00000562039 AGMOQ6ZNB7 445 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms