RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 TELO2Q9Y4R8 837 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 GRID2IPA4D2P6 1211 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 DDX3XO00571 662 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMG1-205ENST00000561947 DDNO94850 711 aaPredicted RBP10.67□□□□□ -0.7
SMG1-205ENST00000561947 ACTR2P61160 394 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 PPP3CAQ08209 521 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 C1orf220Q5T0J3 134 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 ABHD15Q6UXT9 468 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 CCDC60Q8IWA6 550 aaPredicted RBP10.67□□□□□ -0.7
SMG1-205ENST00000561947 MMGT1Q8N4V1 131 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 ZSWIM2Q8NEG5 633 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 DNERQ8NFT8 737 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 OLIG1Q8TAK6 271 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 BSNDQ8WZ55 320 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 PSMB7Q99436 277 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 KMT5AQ9NQR1 393 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 ADARB2Q9NS39 739 aaKnown RBP10.67□□□□□ -0.7
SMG1-205ENST00000561947 MAP2K7O14733 419 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 DGAT1O75907 488 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 CXCR5P32302 372 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 ICAM3P32942 547 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 MCCD1P59942 119 aaPredicted RBP10.66□□□□□ -0.7
SMG1-205ENST00000561947 PRKCEQ02156 737 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 SP4Q02446 784 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 GABPB1Q06547 395 aaPredicted RBP10.66□□□□□ -0.7
SMG1-205ENST00000561947 CETN1Q12798 172 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 STXBP2Q15833 593 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 IFI16Q16666 785 aaKnown RBP10.66□□□□□ -0.7
SMG1-205ENST00000561947 EPC2Q52LR7 807 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 MEI1Q5TIA1 1274 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 CCDC181Q5TID7 509 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 PHLDB3Q6NSJ2 640 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 MIS18BP1Q6P0N0 1132 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 DLK2Q6UY11 383 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 LBX2Q6XYB7 198 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 MCPH1Q8NEM0 835 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 LNX1Q8TBB1 728 aaPredicted RBP10.66□□□□□ -0.7
SMG1-205ENST00000561947 PLEKHO2Q8TD55 490 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 NTPCRQ9BSD7 190 aaKnown RBP10.66□□□□□ -0.7
SMG1-205ENST00000561947 KIFC3Q9BVG8 833 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 UBXN6Q9BZV1 441 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 PDLIM7Q9NR12 457 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 SEPT9Q9UHD8 586 aaPredicted RBP10.66□□□□□ -0.7
SMG1-205ENST00000561947 INTUQ9ULD6 942 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 CSADQ9Y600 493 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 PFASO15067 1338 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 IGSF9BQ9UPX0 1349 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 DENND3A2RUS2 1198 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 ANKRD63C9JTQ0 380 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 ADM5C9JUS6 153 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 FTCDO95954 541 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 ADRB2P07550 413 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 H2AFZP0C0S5 128 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 SUPT20HL2P0C7V6 817 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 CCDC172P0C7W6 258 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 PAFAH1B1P43034 410 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 H2AFVQ71UI9 128 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 HDXQ7Z353 690 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 SPATA4Q8NEY3 305 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 SLC30A5Q8TAD4 765 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 U2AF1L4Q8WU68 220 aaKnown RBP10.66□□□□□ -0.7
SMG1-205ENST00000561947 VTI1AQ96AJ9 217 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 DCPSQ96C86 337 aaKnown RBP10.66□□□□□ -0.7
SMG1-205ENST00000561947 SYT11Q9BT88 431 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 PRDM10Q9NQV6 1147 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 RNF14Q9UBS8 474 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 L1RE1Q9UN81 338 aa10.66□□□□□ -0.7
SMG1-205ENST00000561947 PMM2O15305 246 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 EIF3JO75822 258 aaKnown RBP10.65□□□□□ -0.7
SMG1-205ENST00000561947 ADSSP30520 456 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 GCLMP48507 274 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 SOX10P56693 466 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 RTP1P59025 263 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 CCDC70Q6NSX1 233 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 RIOX2Q8IUF8 465 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 SULF1Q8IWU6 871 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 ANKRD35Q8N283 1001 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 CNKSR2Q8WXI2 1034 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 ATP6V0A4Q9HBG4 840 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 XPNPEP1Q9NQW7 623 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 CYP26B1Q9NR63 512 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 ST7Q9NRC1 585 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 BTBD7Q9P203 1132 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 FBXO40Q9UH90 709 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 A0A0A6YYK5 440 aaPredicted RBP10.65□□□□□ -0.7
SMG1-205ENST00000561947 GOLGA8IPA6NC78 632 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 GOLGA8JA6NMD2 632 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 SORBS3O60504 671 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 MXI1P50539 228 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 ALDH5A1P51649 535 aaPredicted RBP10.65□□□□□ -0.7
SMG1-205ENST00000561947 SP2Q02086 613 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 CNTN2Q02246 1040 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 KIF22Q14807 665 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 ARHGAP44Q17R89 818 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 XKR3Q5GH77 459 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 DNAAF5Q86Y56 855 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 SMARCAL1Q9NZC9 954 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 EHD2Q9NZN4 543 aa10.65□□□□□ -0.7
SMG1-205ENST00000561947 LRRC37A2A6NM11 1700 aa10.65□□□□□ -0.71
SMG1-205ENST00000561947 ADGRA3Q8IWK6 1321 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms