RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 TRIM49CP0CI26 452 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 TGFB3P10600 412 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 PRLRP16471 622 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 UBA1P22314 1058 aaKnown RBP13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 MOGSQ13724 837 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 NEDD9Q14511 834 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 CBWD6Q4V339 395 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 CBWD3Q5JTY5 395 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 CBWD5Q5RIA9 395 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 FAM160B1Q5W0V3 765 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 KCNV1Q6PIU1 500 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 ZNF526Q8TF50 670 aaPredicted RBP13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 OPTNQ96CV9 577 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 CBWD1Q9BRT8 395 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 PAGR1Q9BTK6 254 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 XPNPEP1Q9NQW7 623 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 APEX2Q9UBZ4 518 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 USP20Q9Y2K6 914 aa13.77□□□□□ -0.21
AC055717.2-201ENST00000561864 A0A087X0T9 212 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 F8VZ95 297 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 MOCS3O95396 460 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 TUBBP07437 444 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 FAM228BP0C875 321 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 SOX5P35711 763 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 RFC5P40937 340 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 SP2Q02086 613 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 ARID5AQ03989 594 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 PTK2Q05397 1052 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 EMC2Q15006 297 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 NAB2Q15742 525 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 LDLRAD1Q5T700 205 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 SEPT14Q6ZU15 432 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 CYFIP1Q7L576 1253 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 USP37Q86T82 979 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 MSANTD4Q8NCY6 345 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 SHCBP1Q8NEM2 672 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 BSNDQ8WZ55 320 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 SH2D3AQ9BRG2 576 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 NIFKQ9BYG3 293 aaKnown RBP13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 POLR3FQ9H1D9 316 aaPredicted RBP13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 PCIF1Q9H4Z3 704 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 MROH8Q9H579 483 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 MLXIPQ9HAP2 919 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 PUF60Q9UHX1 559 aaKnown RBP13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 DNAJC12Q9UKB3 198 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 AJAP1Q9UKB5 411 aaPredicted RBP13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 INTUQ9ULD6 942 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 NENFQ9UMX5 172 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 SNX12Q9UMY4 172 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 CAPN6Q9Y6Q1 641 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 DUSP10Q9Y6W6 482 aa13.76□□□□□ -0.21
AC055717.2-201ENST00000561864 EMSYQ7Z589 1322 aa13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 FARP2O94887 1054 aaPredicted RBP13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 TCP1P17987 556 aaKnown RBP13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 GARTP22102 1010 aa13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 POLGP54098 1239 aaPredicted RBP13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 SP4Q02446 784 aa13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 SNAPC2Q13487 334 aa13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 BMS1Q14692 1282 aaKnown RBP13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 IFI16Q16666 785 aaKnown RBP13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 EPC2Q52LR7 807 aa13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 BRDTQ58F21 947 aaPredicted RBP13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 ZNF571Q7Z3V5 609 aaPredicted RBP13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 PNMA8AQ86V59 439 aaPredicted RBP13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 TMC2Q8TDI7 906 aa13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 AFAP1L1Q8TED9 768 aa13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 FAM167AQ96KS9 214 aa13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 TAF1DQ9H5J8 278 aaPredicted RBP13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 ARHGAP28Q9P2N2 729 aa13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 PNMA3Q9UL41 463 aa13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 HYOU1Q9Y4L1 999 aa13.75□□□□□ -0.21
AC055717.2-201ENST00000561864 DNAJC25-GNG10A0A024R161 153 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 GSTTP1A0A1W2PQM5 241 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 TISP43B9A030 160 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 ENC1O14682 589 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 KIAA0391O15091 583 aaKnown RBP13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 GTF2H1P32780 548 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 MXI1P50539 228 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 FSTL1Q12841 308 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 KCTD2Q14681 263 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 BRD3Q15059 726 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 SNRNP35Q16560 246 aaKnown RBP13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 MTERF2Q49AM1 385 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 C1orf220Q5T0J3 134 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 GPAT2Q6NUI2 795 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 GJB7Q6PEY0 223 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 METTL7BQ6UX53 244 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 MOB2Q70IA6 237 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 ZNF572Q7Z3I7 529 aaPredicted RBP13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 LMO3Q8TAP4 145 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 FBXL18Q96ME1 805 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 MMP19Q99542 508 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 DHX33Q9H6R0 707 aaKnown RBP13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 KIAA1586Q9HCI6 787 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 NRBP2Q9NSY0 501 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 RBPJLQ9UBG7 517 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 HDAC6Q9UBN7 1215 aa13.74□□□□□ -0.21
AC055717.2-201ENST00000561864 ADAMTS1Q9UHI8 967 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms