RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 SLC26A6Q9BXS9 759 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 POMKQ9H5K3 350 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 NCOA5Q9HCD5 579 aaKnown RBP9.44□□□□□ -0.9
PALB2-202ENST00000561514 ZSWIM6Q9HCJ5 1215 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 KCNMB3Q9NPA1 279 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 SORCS3Q9UPU3 1222 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 USTQ9Y2C2 406 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 NR2E1Q9Y466 385 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 SAMM50Q9Y512 469 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 PTPRZ1P23471 2315 aaPredicted RBP9.44□□□□□ -0.9
PALB2-202ENST00000561514 A0A087WZ62 844 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 C2CD4DB7Z1M9 353 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 PROB1E7EW31 1015 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 CHMP2AO43633 222 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 B4GALT3O60512 393 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 LILRB3O75022 631 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 DEXIO95424 95 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 GALTP07902 379 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 AVPR2P30518 371 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 MTHFRP42898 656 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 ALDH7A1P49419 539 aaKnown RBP9.43□□□□□ -0.9
PALB2-202ENST00000561514 PPP2R5CQ13362 524 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 MTMR3Q13615 1198 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 GIT2Q14161 759 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 NOMO2Q5JPE7 1267 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 ANO5Q75V66 913 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 MRPL10Q7Z7H8 261 aaKnown RBP9.43□□□□□ -0.9
PALB2-202ENST00000561514 KREMEN2Q8NCW0 462 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 IPO4Q8TEX9 1081 aaKnown RBP9.43□□□□□ -0.9
PALB2-202ENST00000561514 BCL7CQ8WUZ0 217 aaPredicted RBP9.43□□□□□ -0.9
PALB2-202ENST00000561514 GJA10Q969M2 543 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 ZNF274Q96GC6 653 aaPredicted RBP9.43□□□□□ -0.9
PALB2-202ENST00000561514 TMEM169Q96HH4 297 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 ZNF668Q96K58 619 aaPredicted RBP9.43□□□□□ -0.9
PALB2-202ENST00000561514 RIPOR3Q96MK2 946 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 NAP1L5Q96NT1 182 aaPredicted RBP9.43□□□□□ -0.9
PALB2-202ENST00000561514 JPH2Q9BR39 696 aaPredicted RBP9.43□□□□□ -0.9
PALB2-202ENST00000561514 FDXACB1Q9BRP7 624 aaPredicted RBP9.43□□□□□ -0.9
PALB2-202ENST00000561514 RHOBTB2Q9BYZ6 727 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 TM6SF1Q9BZW5 370 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 INO80BQ9C086 356 aaPredicted RBP9.43□□□□□ -0.9
PALB2-202ENST00000561514 IRF2BPLQ9H1B7 796 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 IFT122Q9HBG6 1241 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 AGPAT5Q9NUQ2 364 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 FAM105AQ9NUU6 356 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 TBC1D13Q9NVG8 400 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 STK39Q9UEW8 545 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 CDH22Q9UJ99 828 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 VAV3Q9UKW4 847 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 NAP1L2Q9ULW6 460 aaPredicted RBP9.43□□□□□ -0.9
PALB2-202ENST00000561514 CACNA1AO00555 2505 aa9.43□□□□□ -0.9
PALB2-202ENST00000561514 MYO15AQ9UKN7 3530 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 FAM186AA6NE01 2351 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 TMEM150BA6NC51 233 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 SLC37A4O43826 429 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 CSDE1O75534 798 aaKnown RBP9.42□□□□□ -0.9
PALB2-202ENST00000561514 OFD1O75665 1012 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 REC8O95072 547 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 BRD1O95696 1058 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 EFEMP2O95967 443 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 TPM2P07951 284 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 DNM2P50570 870 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 NLRP5P59047 1200 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 PSMC5P62195 406 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 PTPN14Q15678 1187 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 MTERF2Q49AM1 385 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 PPP4R3AQ6IN85 833 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 CES5AQ6NT32 575 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 LLGL2Q6P1M3 1020 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 GLB1LQ6UWU2 654 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 AGMOQ6ZNB7 445 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 RUFY3Q7L099 469 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 TRMT1LQ7Z2T5 733 aaKnown RBP9.42□□□□□ -0.9
PALB2-202ENST00000561514 KRT25Q7Z3Z0 450 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 TRIM22Q8IYM9 498 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 BLIDQ8IZY5 108 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 VPS52Q8N1B4 723 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 SCLT1Q96NL6 688 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 DHX33Q9H6R0 707 aaKnown RBP9.42□□□□□ -0.9
PALB2-202ENST00000561514 NRDE2Q9H7Z3 1164 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 CYP26B1Q9NR63 512 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 SUCLA2Q9P2R7 463 aaPredicted RBP9.42□□□□□ -0.9
PALB2-202ENST00000561514 SEPT9Q9UHD8 586 aaPredicted RBP9.42□□□□□ -0.9
PALB2-202ENST00000561514 PIN4Q9Y237 131 aaKnown RBP9.42□□□□□ -0.9
PALB2-202ENST00000561514 DMDP11532 3685 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 LOXHD1Q8IVV2 1947 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 SPTBN4Q9H254 2564 aa9.42□□□□□ -0.9
PALB2-202ENST00000561514 KMT2EQ8IZD2 1858 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 STK36Q9NRP7 1315 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 CNTNAP2Q9UHC6 1331 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.41□□□□□ -0.9
PALB2-202ENST00000561514 MEIS3P2A8K0S8 358 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 NT5C1B-RDH14C9J2C7 533 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 EML1O00423 815 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 TBX3O15119 743 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 GALR2O43603 387 aaPredicted RBP9.41□□□□□ -0.9
PALB2-202ENST00000561514 ST18O60284 1047 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 ZC3H11AO75152 810 aaKnown RBP eCLIP9.41□□□□□ -0.9
PALB2-202ENST00000561514 CXCL14O95715 111 aa9.41□□□□□ -0.9
PALB2-202ENST00000561514 PDGFBP01127 241 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms