RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	SDHA	P31040	664 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	FNTB	P49356	437 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	SCAND1	P57086	179 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	SMAD3	P84022	425 aa	Known RBP	5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	PFKP	Q01813	784 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	MTMR1	Q13613	665 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	TERF2	Q15554	542 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	SMAD2	Q15796	467 aa	Known RBP	5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	PLEKHG6	Q3KR16	790 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	SPATS1	Q496A3	300 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	TTC38	Q5R3I4	469 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	ODR4	Q5SWX8	454 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	CATSPERE	Q5SY80	951 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	PRAMEF9	Q5VWM5	478 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	CD276	Q5ZPR3	534 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	CREB3L3	Q68CJ9	461 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	STK32C	Q86UX6	486 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	AMOTL1	Q8IY63	956 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	GPATCH11	Q8N954	259 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	ZNF610	Q8N9Z0	462 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	SYT8	Q8NBV8	401 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	CLRN3	Q8NCR9	226 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	SMARCC2	Q8TAQ2	1214 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	CALML6	Q8TD86	181 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	MZB1	Q8WU39	189 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	CPA5	Q8WXQ8	436 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	FERMT2	Q96AC1	680 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	TEPSIN	Q96N21	525 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	ADAM7	Q9H2U9	754 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	CNTD2	Q9H8S5	307 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	MSRA	Q9UJ68	235 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	TRHDE	Q9UKU6	1024 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	G3BP2	Q9UN86	482 aa	Known RBP	5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	ADAMTS13	Q76LX8	1427 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	DIP2A	Q14689	1571 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	SETBP1	Q9Y6X0	1596 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	NKTR	P30414	1462 aa	Known RBP	5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	ST20-MTHFS	A0A0A6YYL1	179 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	MYBL2	P10244	700 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	PTGS1	P23219	599 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	GLRB	P48167	497 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	CDR1	P51861	262 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	EPHB3	P54753	998 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	ROM1	Q03395	351 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	LRRC32	Q14392	662 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	EPHA7	Q15375	998 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	CLUL1	Q15846	466 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	VMAC	Q2NL98	169 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	CR1L	Q2VPA4	569 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	SYDE2	Q5VT97	1194 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	PGM2L1	Q6PCE3	622 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	ESPNL	Q6ZVH7	1005 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	RASSF3	Q86WH2	238 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	PHYKPL	Q8IUZ5	450 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	IGDCC4	Q8TDY8	1250 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	STAG1	Q8WVM7	1258 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	CLIC6	Q96NY7	704 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	TMEM209	Q96SK2	561 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	UBA5	Q9GZZ9	404 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	MS4A5	Q9H3V2	200 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	POFUT1	Q9H488	388 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	ZMAT4	Q9H898	229 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	PCDH18	Q9HCL0	1135 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	C14orf119	Q9NWQ9	140 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	ARHGAP20	Q9P2F6	1191 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	RBPJL	Q9UBG7	517 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	TCEAL9	Q9UHQ7	104 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	ASB1	Q9Y576	335 aa		5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	XRN1	Q8IZH2	1706 aa	Known RBP	5.19	□□□□□ -1.58
LRRC28-222	ENST00000561431	SETD1A	O15047	1707 aa	Known RBP	5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	RASSF10	A6NK89	507 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	GOLGA6L22	H0YM25	854 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	N4BP3	O15049	544 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	C8B	P07358	591 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	INSRR	P14616	1297 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	AOAH	P28039	575 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	MC4R	P32245	332 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	PHC1	P78364	1004 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	SLC6A3	Q01959	620 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	SKIDA1	Q1XH10	827 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	GPR158	Q5T848	1215 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	SLFN12L	Q6IEE8	588 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	ESRP1	Q6NXG1	681 aa	Known RBP	5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	B3GNT8	Q7Z7M8	397 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	SP8	Q8IXZ3	490 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	MORC4	Q8TE76	937 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	JDP2	Q8WYK2	163 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	ZSWIM3	Q96MP5	696 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	ANO3	Q9BYT9	981 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	ZDHHC5	Q9C0B5	715 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	VTA1	Q9NP79	307 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	INCENP	Q9NQS7	918 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	AASDHPPT	Q9NRN7	309 aa		5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	TOPORS	Q9NS56	1045 aa	Predicted RBP	5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	USP36	Q9P275	1121 aa	Known RBP	5.18	□□□□□ -1.58
LRRC28-222	ENST00000561431	CROT	Q9UKG9	612 aa		5.18	□□□□□ -1.58

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