RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 MYL1P05976 194 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 GHRP10912 638 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 DARSP14868 501 aaKnown RBP11.35□□□□□ -0.59
LRRC28-221ENST00000561276 RFC2P35250 354 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 NAMPTP43490 491 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 PHKA2P46019 1235 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 SMTNP53814 917 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 ASIC1P78348 528 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 FPGSQ05932 587 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 NFX1Q12986 1120 aaKnown RBP11.35□□□□□ -0.59
LRRC28-221ENST00000561276 DMP1Q13316 513 aaPredicted RBP11.35□□□□□ -0.59
LRRC28-221ENST00000561276 LPIN1Q14693 890 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 HERC4Q5GLZ8 1057 aaPredicted RBP11.35□□□□□ -0.59
LRRC28-221ENST00000561276 SRGAP1Q7Z6B7 1085 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 CCDC65Q8IXS2 484 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 RPUSD2Q8IZ73 545 aaKnown RBP11.35□□□□□ -0.59
LRRC28-221ENST00000561276 VWCEQ96DN2 955 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 NFKBIZQ9BYH8 718 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 MINDY3Q9H8M7 445 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 AGO3Q9H9G7 860 aaKnown RBP11.35□□□□□ -0.59
LRRC28-221ENST00000561276 KMT5AQ9NQR1 393 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 PADI3Q9ULW8 664 aa11.35□□□□□ -0.59
LRRC28-221ENST00000561276 FRMD3A2A2Y4 597 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 INO80B-WBP1J3KQ70 363 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 K7ERI5 159 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 GPR182O15218 404 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 CXCL10P02778 98 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 ACRP10323 421 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 GAP43P17677 238 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 FGFR4P22455 802 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 CD52P31358 61 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 PPIGQ13427 754 aaKnown RBP eCLIP11.34□□□□□ -0.59
LRRC28-221ENST00000561276 PNOCQ13519 176 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 POSTNQ15063 836 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 PLEKHG4Q58EX7 1191 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 TSHZ1Q6ZSZ6 1077 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 C16orf59Q7L2K0 433 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 HAUS6Q7Z4H7 955 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 SFR1Q86XK3 245 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 ZBTB8OSQ8IWT0 167 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 FAM178BQ8IXR5 827 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 ELOA2Q8IYF1 753 aaPredicted RBP11.34□□□□□ -0.59
LRRC28-221ENST00000561276 DBF4BQ8NFT6 615 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 TET1Q8NFU7 2136 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 DEPTORQ8TB45 409 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 GPT2Q8TD30 523 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 SPIRE2Q8WWL2 714 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 C2orf40Q9H1Z8 148 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 IL23AQ9NPF7 189 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 TBC1D7Q9P0N9 293 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 HOOK1Q9UJC3 728 aaKnown RBP11.34□□□□□ -0.59
LRRC28-221ENST00000561276 ST3GAL5Q9UNP4 418 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 ADGRA3Q8IWK6 1321 aa11.34□□□□□ -0.59
LRRC28-221ENST00000561276 KLRC4O43908 158 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 FGBP02675 491 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 RPN1P04843 607 aaKnown RBP11.33□□□□□ -0.6
LRRC28-221ENST00000561276 NMT1P30419 496 aaKnown RBP11.33□□□□□ -0.6
LRRC28-221ENST00000561276 MAGEA10P43363 369 aaPredicted RBP11.33□□□□□ -0.6
LRRC28-221ENST00000561276 EFNA5P52803 228 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 EPHB4P54760 987 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 NCKAP1LP55160 1127 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 MBTD1Q05BQ5 628 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 DPYDQ12882 1025 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 COASYQ13057 564 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 PAK2Q13177 524 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 CAMK4Q16566 473 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 CDCA2Q69YH5 1023 aaPredicted RBP11.33□□□□□ -0.6
LRRC28-221ENST00000561276 UNC13DQ70J99 1090 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 CATSPER4Q7RTX7 472 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 ZNF720Q7Z2F6 126 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 FAM228AQ86W67 206 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 TMEM161BQ8NDZ6 487 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 SEPT8Q92599 483 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 ERCC4Q92889 916 aaPredicted RBP11.33□□□□□ -0.6
LRRC28-221ENST00000561276 HPS3Q969F9 1004 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 FIZ1Q96SL8 496 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 KIFC3Q9BVG8 833 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 IFIH1Q9BYX4 1025 aaKnown RBP11.33□□□□□ -0.6
LRRC28-221ENST00000561276 FZD8Q9H461 694 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 TMEM134Q9H6X4 195 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 MRPL44Q9H9J2 332 aaKnown RBP11.33□□□□□ -0.6
LRRC28-221ENST00000561276 ARHGAP28Q9P2N2 729 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 SEL1LQ9UBV2 794 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 PCDHA5Q9Y5H7 936 aa11.33□□□□□ -0.6
LRRC28-221ENST00000561276 DENND3A2RUS2 1198 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 H0YCG3 227 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 ERLIN2O94905 339 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 PFKMP08237 780 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 MAPTP10636 758 aaKnown RBP11.32□□□□□ -0.6
LRRC28-221ENST00000561276 SFPQP23246 707 aaKnown RBP eCLIP11.32□□□□□ -0.6
LRRC28-221ENST00000561276 GTF2BQ00403 316 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 EHHADHQ08426 723 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 NCBP1Q09161 790 aaKnown RBP11.32□□□□□ -0.6
LRRC28-221ENST00000561276 PSMD2Q13200 908 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 IKBKEQ14164 716 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 PCBP1Q15365 356 aaKnown RBP eCLIP11.32□□□□□ -0.6
LRRC28-221ENST00000561276 MAPK6Q16659 721 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 TCTN1Q2MV58 587 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 KMT5BQ4FZB7 885 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 ZC2HC1CQ53FD0 456 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms