RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 FAM105AQ9NUU6 356 aa19.17■□□□□ 0.66
CDC42BPB-208ENST00000561271 C2orf16Q68DN1 1984 aa19.17■□□□□ 0.66
CDC42BPB-208ENST00000561271 ST18O60284 1047 aa19.16■□□□□ 0.66
CDC42BPB-208ENST00000561271 CD2BP2O95400 341 aaKnown RBP19.16■□□□□ 0.66
CDC42BPB-208ENST00000561271 NRIP1P48552 1158 aa19.16■□□□□ 0.66
CDC42BPB-208ENST00000561271 RARRES1P49788 294 aa19.16■□□□□ 0.66
CDC42BPB-208ENST00000561271 UBE3AQ05086 875 aa19.16■□□□□ 0.66
CDC42BPB-208ENST00000561271 CSPP1Q1MSJ5 1256 aa19.16■□□□□ 0.66
CDC42BPB-208ENST00000561271 KCNT2Q6UVM3 1135 aa19.16■□□□□ 0.66
CDC42BPB-208ENST00000561271 SRGAP1Q7Z6B7 1085 aa19.16■□□□□ 0.66
CDC42BPB-208ENST00000561271 ASAP3Q8TDY4 903 aa19.16■□□□□ 0.66
CDC42BPB-208ENST00000561271 PPP2R3CQ969Q6 453 aa19.16■□□□□ 0.66
CDC42BPB-208ENST00000561271 ZNF558Q96NG5 402 aa19.16■□□□□ 0.66
CDC42BPB-208ENST00000561271 PDCD11Q14690 1871 aaKnown RBP19.16■□□□□ 0.66
CDC42BPB-208ENST00000561271 GRXCR2A6NFK2 248 aa19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 NCK2O43639 380 aa19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 USO1O60763 962 aaKnown RBP19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 MED24O75448 989 aa19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 DGAT1O75907 488 aa19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 SPATA31C1P0DKV0 1188 aa19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 TECP42680 631 aa19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 RAB27AP51159 221 aa19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 ERVFC1P60507 584 aa19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 ORC2Q13416 577 aaPredicted RBP19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 POTEGQ6S5H5 508 aa19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 RBM23Q86U06 439 aaKnown RBP19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 TRAIPQ9BWF2 469 aa19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 MRPL9Q9BYD2 267 aaKnown RBP19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 UPF2Q9HAU5 1272 aaKnown RBP19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 CD320Q9NPF0 282 aa19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 NOL7Q9UMY1 257 aaKnown RBP19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 INPP5FQ9Y2H2 1132 aa19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 MTCL1Q9Y4B5 1905 aaKnown RBP19.15■□□□□ 0.66
CDC42BPB-208ENST00000561271 DENND4AQ7Z401 1863 aa19.14■□□□□ 0.65
CDC42BPB-208ENST00000561271 PPM1AP35813 382 aa19.14■□□□□ 0.65
CDC42BPB-208ENST00000561271 NDUFV1P49821 464 aa19.14■□□□□ 0.65
CDC42BPB-208ENST00000561271 CAPSQ13938 189 aa19.14■□□□□ 0.65
CDC42BPB-208ENST00000561271 PLPP4Q5VZY2 271 aa19.14■□□□□ 0.65
CDC42BPB-208ENST00000561271 CATSPER3Q86XQ3 398 aa19.14■□□□□ 0.65
CDC42BPB-208ENST00000561271 FAM178BQ8IXR5 827 aa19.14■□□□□ 0.65
CDC42BPB-208ENST00000561271 MICAL1Q8TDZ2 1067 aa19.14■□□□□ 0.65
CDC42BPB-208ENST00000561271 POLR3FQ9H1D9 316 aaPredicted RBP19.14■□□□□ 0.65
CDC42BPB-208ENST00000561271 TUFT1Q9NNX1 390 aa19.14■□□□□ 0.65
CDC42BPB-208ENST00000561271 PCDHB2Q9Y5E7 798 aa19.14■□□□□ 0.65
CDC42BPB-208ENST00000561271 FSCN2O14926 492 aa19.13■□□□□ 0.65
CDC42BPB-208ENST00000561271 ASAP2O43150 1006 aa19.13■□□□□ 0.65
CDC42BPB-208ENST00000561271 ERLIN2O94905 339 aa19.13■□□□□ 0.65
CDC42BPB-208ENST00000561271 GLP2RO95838 553 aa19.13■□□□□ 0.65
CDC42BPB-208ENST00000561271 SKIP12755 728 aa19.13■□□□□ 0.65
CDC42BPB-208ENST00000561271 TRAPPC10P48553 1259 aa19.13■□□□□ 0.65
CDC42BPB-208ENST00000561271 ADAM15Q13444 863 aa19.13■□□□□ 0.65
CDC42BPB-208ENST00000561271 MXD4Q14582 209 aaPredicted RBP19.13■□□□□ 0.65
CDC42BPB-208ENST00000561271 PUS10Q3MIT2 529 aaKnown RBP19.13■□□□□ 0.65
CDC42BPB-208ENST00000561271 GLB1LQ6UWU2 654 aa19.13■□□□□ 0.65
CDC42BPB-208ENST00000561271 EFHBQ8N7U6 833 aa19.13■□□□□ 0.65
CDC42BPB-208ENST00000561271 MRPS27Q92552 414 aaKnown RBP19.13■□□□□ 0.65
CDC42BPB-208ENST00000561271 TMX3Q96JJ7 454 aa19.13■□□□□ 0.65
CDC42BPB-208ENST00000561271 ENTPD7Q9NQZ7 604 aa19.13■□□□□ 0.65
CDC42BPB-208ENST00000561271 NT5C1B-RDH14C9J2C7 533 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 PER2O15055 1255 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 TSPAN1O60635 241 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 ZC3H11AO75152 810 aaKnown RBP eCLIP19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 GLRA2P23416 452 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 U2AF2P26368 475 aaKnown RBP eCLIP19.12■□□□□ 0.656e-6■■■■□ 24.4
CDC42BPB-208ENST00000561271 HOXA11P31270 313 aaPredicted RBP19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 ARL2P36404 184 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 PTENP60484 403 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 RBM10P98175 930 aaKnown RBP19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 PLCB3Q01970 1234 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 TFDP1Q14186 410 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 UBXN11Q5T124 520 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 MAEAQ7L5Y9 396 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 SLC39A11Q8N1S5 342 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 ERMNQ8TAM6 284 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 KHSRPQ92945 711 aaKnown RBP eCLIP19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 TCF25Q9BQ70 676 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 POLR3CQ9BUI4 534 aaPredicted RBP19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 TLE6Q9H808 572 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 GPRC5CQ9NQ84 441 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 TBC1D13Q9NVG8 400 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 SPG21Q9NZD8 308 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 BARX2Q9UMQ3 279 aaPredicted RBP19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 LZTS1Q9Y250 596 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 MYO10Q9HD67 2058 aa19.12■□□□□ 0.65
CDC42BPB-208ENST00000561271 INO80B-WBP1J3KQ70 363 aa19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 MBTPS2O43462 519 aa19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 B4GALT3O60512 393 aa19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 ZNF623O75123 536 aa19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 SSTR3P32745 418 aaPredicted RBP19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 TOB1P50616 345 aaPredicted RBP19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 BCAR1P56945 870 aa19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 MBTD1Q05BQ5 628 aa19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 NOMO2Q5JPE7 1267 aa19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 AGMOQ6ZNB7 445 aa19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 TMEM173Q86WV6 379 aaPredicted RBP19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 CPB2Q96IY4 423 aa19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 TBC1D32Q96NH3 1257 aa19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 CLEC1BQ9P126 229 aa19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 CD207Q9UJ71 328 aa19.11■□□□□ 0.65
CDC42BPB-208ENST00000561271 FAM50BQ9Y247 325 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms