RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CATSPER4Q7RTX7 472 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 ZNF598Q86UK7 904 aaKnown RBP15.42■□□□□ 0.06
TPM1-230ENST00000561266 ECHDC2Q86YB7 292 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 MCPH1Q8NEM0 835 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 ARNTL2Q8WYA1 636 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 SYMPKQ92797 1274 aaKnown RBP15.42■□□□□ 0.06
TPM1-230ENST00000561266 CPB2Q96IY4 423 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 AK8Q96MA6 479 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 KIFC3Q9BVG8 833 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 STK24Q9Y6E0 443 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 MORC2Q9Y6X9 1032 aaPredicted RBP15.42■□□□□ 0.06
TPM1-230ENST00000561266 SFI1A8K8P3 1242 aa15.41■□□□□ 0.06
TPM1-230ENST00000561266 TSPAN1O60635 241 aa15.41■□□□□ 0.06
TPM1-230ENST00000561266 HIP1RO75146 1068 aa15.41■□□□□ 0.06
TPM1-230ENST00000561266 PLA2G4BP0C869 781 aa15.41■□□□□ 0.06
TPM1-230ENST00000561266 ERVK-21P61565 698 aa15.41■□□□□ 0.06
TPM1-230ENST00000561266 CACNB1Q02641 598 aaPredicted RBP15.41■□□□□ 0.06
TPM1-230ENST00000561266 POU5F1BQ06416 359 aa15.41■□□□□ 0.06
TPM1-230ENST00000561266 RAD51AP2Q09MP3 1159 aa15.41■□□□□ 0.06
TPM1-230ENST00000561266 MCM6Q14566 821 aa15.41■□□□□ 0.06
TPM1-230ENST00000561266 ODR4Q5SWX8 454 aa15.41■□□□□ 0.06
TPM1-230ENST00000561266 CDR2LQ86X02 465 aaPredicted RBP15.41■□□□□ 0.06
TPM1-230ENST00000561266 SYT2Q8N9I0 419 aaPredicted RBP15.41■□□□□ 0.06
TPM1-230ENST00000561266 CCSER1Q9C0I3 900 aa15.41■□□□□ 0.06
TPM1-230ENST00000561266 C1orf112Q9NSG2 853 aa15.41■□□□□ 0.06
TPM1-230ENST00000561266 AGPAT5Q9NUQ2 364 aa15.41■□□□□ 0.06
TPM1-230ENST00000561266 PIN4Q9Y237 131 aaKnown RBP15.41■□□□□ 0.06
TPM1-230ENST00000561266 MRPL42Q9Y6G3 142 aaKnown RBP15.41■□□□□ 0.06
TPM1-230ENST00000561266 PRUNE2Q8WUY3 3088 aa15.4■□□□□ 0.06
TPM1-230ENST00000561266 A0A0U1RQF3 1178 aa15.4■□□□□ 0.06
TPM1-230ENST00000561266 LRRIQ4A6NIV6 560 aa15.4■□□□□ 0.06
TPM1-230ENST00000561266 INO80B-WBP1J3KQ70 363 aa15.4■□□□□ 0.06
TPM1-230ENST00000561266 SSBP05455 408 aaKnown RBP eCLIP15.4■□□□□ 0.06
TPM1-230ENST00000561266 ZSCAN20P17040 1043 aaPredicted RBP15.4■□□□□ 0.06
TPM1-230ENST00000561266 SFPQP23246 707 aaKnown RBP eCLIP15.4■□□□□ 0.06
TPM1-230ENST00000561266 UBA7P41226 1012 aa15.4■□□□□ 0.06
TPM1-230ENST00000561266 PHKA2P46019 1235 aa15.4■□□□□ 0.06
TPM1-230ENST00000561266 NAALADL2Q58DX5 795 aa15.4■□□□□ 0.06
TPM1-230ENST00000561266 CLLU1OSQ5K130 101 aa15.4■□□□□ 0.06
TPM1-230ENST00000561266 CDCA2Q69YH5 1023 aaPredicted RBP15.4■□□□□ 0.06
TPM1-230ENST00000561266 LRRC55Q6ZSA7 311 aa15.4■□□□□ 0.06
TPM1-230ENST00000561266 GDPD5Q8WTR4 605 aa15.4■□□□□ 0.06
TPM1-230ENST00000561266 LPPQ93052 612 aa15.4■□□□□ 0.06
TPM1-230ENST00000561266 EIF2AQ9BY44 585 aaKnown RBP15.4■□□□□ 0.06
TPM1-230ENST00000561266 INO80BQ9C086 356 aaPredicted RBP15.4■□□□□ 0.06
TPM1-230ENST00000561266 STXBP5LQ9Y2K9 1186 aa15.4■□□□□ 0.06
TPM1-230ENST00000561266 PCDHB7Q9Y5E2 793 aa15.4■□□□□ 0.06
TPM1-230ENST00000561266 PLXNA4Q9HCM2 1894 aa15.4■□□□□ 0.06
TPM1-230ENST00000561266 SPTLC2O15270 562 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 ARF4P18085 180 aaPredicted RBP15.39■□□□□ 0.05
TPM1-230ENST00000561266 DDIT3P35638 169 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 TFDP1Q14186 410 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 DHX8Q14562 1220 aaKnown RBP15.39■□□□□ 0.05
TPM1-230ENST00000561266 STK38Q15208 465 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 AXDND1Q5T1B0 1012 aaPredicted RBP15.39■□□□□ 0.05
TPM1-230ENST00000561266 TAS1R3Q7RTX0 852 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 KRI1Q8N9T8 703 aaKnown RBP15.39■□□□□ 0.05
TPM1-230ENST00000561266 RNF169Q8NCN4 708 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 RAD54LQ92698 747 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 ZNF396Q96N95 335 aaPredicted RBP15.39■□□□□ 0.05
TPM1-230ENST00000561266 CASD1Q96PB1 797 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 TGS1Q96RS0 853 aaKnown RBP15.39■□□□□ 0.05
TPM1-230ENST00000561266 NFKBIZQ9BYH8 718 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 PANK2Q9BZ23 570 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 CCDC113Q9H0I3 377 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 NT5C3AQ9H0P0 336 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 ELAC1Q9H777 363 aaKnown RBP15.39■□□□□ 0.05
TPM1-230ENST00000561266 CHST12Q9NRB3 414 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 TMEM161AQ9NX61 479 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 LRFN2Q9ULH4 789 aa15.39■□□□□ 0.05
TPM1-230ENST00000561266 TRIP11Q15643 1979 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 TBKBP1A7MCY6 615 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 YEATS4O95619 227 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 STAG3L1P0CL83 205 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 GUCY2CP25092 1073 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 AFF1P51825 1210 aaKnown RBP15.38■□□□□ 0.05
TPM1-230ENST00000561266 PEX3P56589 373 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 BTG3Q14201 252 aaPredicted RBP15.38■□□□□ 0.05
TPM1-230ENST00000561266 EPC2Q52LR7 807 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 TWF2Q6IBS0 349 aaKnown RBP15.38■□□□□ 0.05
TPM1-230ENST00000561266 SHC4Q6S5L8 630 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 TMEM192Q8IY95 271 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 FIBCD1Q8N539 461 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 SMG8Q8ND04 991 aaKnown RBP15.38■□□□□ 0.05
TPM1-230ENST00000561266 CALML4Q96GE6 196 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 CDK5RAP3Q96JB5 506 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 TRAIPQ9BWF2 469 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 RNF39Q9H2S5 420 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 FZD8Q9H461 694 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 CWH43Q9H720 699 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 FAM105AQ9NUU6 356 aa15.38■□□□□ 0.05
TPM1-230ENST00000561266 SLC26A4O43511 780 aa15.37■□□□□ 0.05
TPM1-230ENST00000561266 PPP6R2O75170 966 aa15.37■□□□□ 0.05
TPM1-230ENST00000561266 FOSL2P15408 326 aa15.37■□□□□ 0.05
TPM1-230ENST00000561266 NAMPTP43490 491 aa15.37■□□□□ 0.05
TPM1-230ENST00000561266 NPTX2P47972 431 aa15.37■□□□□ 0.05
TPM1-230ENST00000561266 AGMOQ6ZNB7 445 aa15.37■□□□□ 0.05
TPM1-230ENST00000561266 CMTR2Q8IYT2 770 aaKnown RBP15.37■□□□□ 0.05
TPM1-230ENST00000561266 HELQQ8TDG4 1101 aa15.37■□□□□ 0.05
TPM1-230ENST00000561266 KIFAP3Q92845 792 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms