RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 MCTP1Q6DN14 999 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 TWF2Q6IBS0 349 aaKnown RBP14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 AGMOQ6ZNB7 445 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 OTUD6AQ7L8S5 288 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 CDR2LQ86X02 465 aaPredicted RBP14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 VN1R2Q8NFZ6 395 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 LRRC15Q8TF66 581 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 UHRF1Q96T88 793 aaPredicted RBP14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 MMTAG2Q9BU76 263 aaKnown RBP14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 POLR3CQ9BUI4 534 aaPredicted RBP14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 PLVAPQ9BX97 442 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 UPF2Q9HAU5 1272 aaKnown RBP14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 TUFT1Q9NNX1 390 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 FAM105AQ9NUU6 356 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 RWDD3Q9Y3V2 267 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 PPME1Q9Y570 386 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 NT5C1B-RDH14C9J2C7 533 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 RPA1P27694 616 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 TRAPPC10P48553 1259 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 PTENP60484 403 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 CUL4AQ13619 759 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 CLUL1Q15846 466 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 CTC1Q2NKJ3 1217 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 SPOUT1Q5T280 376 aaKnown RBP14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 LRRC43Q8N309 656 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 IGSF22Q8N9C0 903 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 SMG8Q8ND04 991 aaKnown RBP14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 JPH2Q9BR39 696 aaPredicted RBP14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 KIFC3Q9BVG8 833 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 TRAIPQ9BWF2 469 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 LMAN2LQ9H0V9 348 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 NOL7Q9UMY1 257 aaKnown RBP14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 COG5Q9UP83 839 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 INPP5FQ9Y2H2 1132 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 HES2Q9Y543 173 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 TTC28Q96AY4 2481 aa14.09□□□□□ -0.15
CHRNA3-208ENST00000561128 FSCN2O14926 492 aa14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 GAS2O43903 313 aaKnown RBP14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 DGAT1O75907 488 aa14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 CCT6AP40227 531 aaKnown RBP14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 GRIN1Q05586 938 aa14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 ORC2Q13416 577 aaPredicted RBP14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 KCNT2Q6UVM3 1135 aa14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 SRGAP1Q7Z6B7 1085 aa14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 IFNLR1Q8IU57 520 aaPredicted RBP14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 SLC39A11Q8N1S5 342 aa14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 ZNF710Q8N1W2 664 aa14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 TCP11Q8WWU5 503 aa14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 PABPC5Q96DU9 382 aaKnown RBP14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 VN1R3Q9BXE9 311 aa14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 CLDND1Q9NY35 253 aa14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 DNAJB4Q9UDY4 337 aa14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 DBR1Q9UK59 544 aaKnown RBP14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 PCDHB2Q9Y5E7 798 aa14.08□□□□□ -0.16
CHRNA3-208ENST00000561128 PER2O15055 1255 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 OFD1O75665 1012 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 ARF4P18085 180 aaPredicted RBP14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 LAG3P18627 525 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 ATP2C1P98194 919 aaPredicted RBP14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 LEXMQ3ZCV2 418 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 EP400NLQ6ZTU2 488 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 RBM23Q86U06 439 aaKnown RBP14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 ZNF280BQ86YH2 543 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 THNSL1Q8IYQ7 743 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 FEZF2Q8TBJ5 459 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 SNX29Q8TEQ0 813 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 CXCL16Q9H2A7 254 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 NXF3Q9H4D5 531 aaKnown RBP14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 IGFLR1Q9H665 355 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 NRDE2Q9H7Z3 1164 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 CHST12Q9NRB3 414 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 DDX19AQ9NUU7 478 aaKnown RBP14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 TBC1D13Q9NVG8 400 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 DACT1Q9NYF0 836 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 SMC3Q9UQE7 1217 aa14.07□□□□□ -0.16
CHRNA3-208ENST00000561128 LRRIQ4A6NIV6 560 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 HIDE1A8MVS5 230 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 E9PMD0 336 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 F8W810 466 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 INO80B-WBP1J3KQ70 363 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 DDHD2O94830 711 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 EOMESO95936 686 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 NRIP1P48552 1158 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 BCAR1P56945 870 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 MAPK7Q13164 816 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 NAALADL2Q58DX5 795 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 PLPP4Q5VZY2 271 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 CDCA2Q69YH5 1023 aaPredicted RBP14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 PADI6Q6TGC4 694 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 MRPL10Q7Z7H8 261 aaKnown RBP14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 ABI1Q8IZP0 508 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 DAW1Q8N136 415 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 ZNF558Q96NG5 402 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 PNMA5Q96PV4 448 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 RUSC1Q9BVN2 902 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 INO80BQ9C086 356 aaPredicted RBP14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 CCDC113Q9H0I3 377 aa14.06□□□□□ -0.16
CHRNA3-208ENST00000561128 BHMT2Q9H2M3 363 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms