RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 TUBGCP5Q96RT8 1024 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 TSPAN18Q96SJ8 248 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 C7orf25Q9BPX7 421 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 WNT8AQ9H1J5 351 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 DEF6Q9H4E7 631 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 PREBQ9HCU5 417 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 ZCCHC17Q9NP64 241 aaKnown RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 SAYSD1Q9NPB0 183 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 OBP2BQ9NPH6 170 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 PRDM6Q9NQX0 595 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 SMYD2Q9NRG4 433 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 DISC1Q9NRI5 854 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 SACM1LQ9NTJ5 587 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 LMBRD1Q9NUN5 540 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 CRIM1Q9NZV1 1036 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 ZSWIM5Q9P217 1185 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 STAP2Q9UGK3 403 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 RASAL2Q9UJF2 1139 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 VPS28Q9UK41 221 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 ITGB1BP2Q9UKP3 347 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 ODF2LQ9ULJ1 636 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 CBLCQ9ULV8 474 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 TMEM5Q9Y2B1 443 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 NPFFR2Q9Y5X5 522 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 ATP23Q9Y6H3 246 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 SOS2Q07890 1332 aaPredicted RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 A0A087X0M5 115 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 A0A1B0GX30 115 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 A0A1W2PPH5 198 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 A0A1W2PQJ5 194 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 UBA6A0AVT1 1052 aaPredicted RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 LGALS16A8MUM7 142 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 FAM171A2A8MVW0 826 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 F5H0A9 414 aaPredicted RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 H7BY64 318 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 ACKR2O00590 384 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 PODXLO00592 558 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TRIM38O00635 465 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 CPLX1O14810 134 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 SHOXO15266 292 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 HOXC11O43248 304 aaPredicted RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 SART1O43290 800 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 FRS3O43559 492 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 GAS2O43903 313 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 LILRB5O75023 590 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 CBX7O95931 251 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 DNTTP04053 509 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 ITGA2BP08514 1039 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 FAM200BP0CF97 657 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 ZSCAN22P10073 491 aaPredicted RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 KITP10721 976 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 COL6A2P12110 1019 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 ATP1A3P13637 1013 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 GSPT1P15170 499 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 ATP6V1B1P15313 513 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 STMN1P16949 149 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 RXRAP19793 462 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 RAB6AP20340 208 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 PDIA3P30101 505 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 CD68P34810 354 aaPredicted RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 BCL6P41182 706 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 UBA7P41226 1012 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 STAT5AP42229 794 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 LIFRP42702 1097 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 PAFAH1B1P43034 410 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 AFMP43652 599 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TNNT3P45378 269 aaPredicted RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 CLK1P49759 484 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 TPD52P55327 224 aaPredicted RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 SUMO3P55854 103 aaPredicted RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 RAB1AP62820 205 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 VAMP2P63027 116 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TMF1P82094 1093 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 ROR1Q01973 937 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 CREMQ03060 361 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TLE2Q04725 743 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 UBE3AQ05086 875 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 RING1Q06587 406 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 LRMPQ12912 555 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 CHAF1BQ13112 559 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 PPP2R5CQ13362 524 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 LRP8Q14114 963 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 SLBPQ14493 270 aaKnown RBP eCLIP2.3□□□□□ -2.04
RTF1-207ENST00000561076 MBTPS1Q14703 1052 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 SNX17Q15036 470 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 NR0B2Q15466 257 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 SMAD1Q15797 465 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 MPEG1Q2M385 716 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 MUM1Q2TAK8 710 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 FIGNQ5HY92 759 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 KHDC1LQ5JSQ8 128 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 TTC38Q5R3I4 469 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 HECTD3Q5T447 861 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 PRAMEF9Q5VWM5 478 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 GPR139Q6DWJ6 353 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 DENND5AQ6IQ26 1287 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 CPLX2Q6PUV4 134 aaKnown RBP2.3□□□□□ -2.04
RTF1-207ENST00000561076 KLHL24Q6TFL4 600 aa2.3□□□□□ -2.04
RTF1-207ENST00000561076 CRTC3Q6UUV7 619 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms