RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SIX5Q8N196 739 aa20.89■□□□□ 0.93
TPM1-226ENST00000560959 RDM1Q8NG50 284 aa20.89■□□□□ 0.93
TPM1-226ENST00000560959 BCL7CQ8WUZ0 217 aaPredicted RBP20.89■□□□□ 0.93
TPM1-226ENST00000560959 NXPE3Q969Y0 559 aa20.89■□□□□ 0.93
TPM1-226ENST00000560959 FAM105AQ9NUU6 356 aa20.89■□□□□ 0.93
TPM1-226ENST00000560959 CACNA1AO00555 2505 aa20.88■□□□□ 0.93
TPM1-226ENST00000560959 CSDE1O75534 798 aaKnown RBP20.88■□□□□ 0.93
TPM1-226ENST00000560959 LMNAP02545 664 aaKnown RBP20.88■□□□□ 0.93
TPM1-226ENST00000560959 CDC27P30260 824 aa20.88■□□□□ 0.93
TPM1-226ENST00000560959 SLC11A1P49279 550 aa20.88■□□□□ 0.93
TPM1-226ENST00000560959 RNASELQ05823 741 aaKnown RBP20.88■□□□□ 0.93
TPM1-226ENST00000560959 BICD2Q8TD16 824 aa20.88■□□□□ 0.93
TPM1-226ENST00000560959 PGBD4Q96DM1 585 aa20.88■□□□□ 0.93
TPM1-226ENST00000560959 CEP89Q96ST8 783 aa20.88■□□□□ 0.93
TPM1-226ENST00000560959 VN1R3Q9BXE9 311 aa20.88■□□□□ 0.93
TPM1-226ENST00000560959 KANSL3Q9P2N6 904 aa20.88■□□□□ 0.93
TPM1-226ENST00000560959 DPP7Q9UHL4 492 aa20.88■□□□□ 0.93
TPM1-226ENST00000560959 SPDYE4A6NLX3 237 aa20.87■□□□□ 0.93
TPM1-226ENST00000560959 MSH4O15457 936 aa20.87■□□□□ 0.93
TPM1-226ENST00000560959 ALDH2P05091 517 aa20.87■□□□□ 0.93
TPM1-226ENST00000560959 CNPP09543 421 aaKnown RBP20.87■□□□□ 0.93
TPM1-226ENST00000560959 USP11P51784 963 aa20.87■□□□□ 0.93
TPM1-226ENST00000560959 XKR3Q5GH77 459 aa20.87■□□□□ 0.93
TPM1-226ENST00000560959 STAMQ92783 540 aa20.87■□□□□ 0.93
TPM1-226ENST00000560959 LPPQ93052 612 aa20.87■□□□□ 0.93
TPM1-226ENST00000560959 ANO2Q9NQ90 1003 aa20.87■□□□□ 0.93
TPM1-226ENST00000560959 MRPL17Q9NRX2 175 aaKnown RBP20.87■□□□□ 0.93
TPM1-226ENST00000560959 SSX2IPQ9Y2D8 614 aa20.87■□□□□ 0.93
TPM1-226ENST00000560959 ZNF292O60281 2723 aa20.87■□□□□ 0.93
TPM1-226ENST00000560959 A0A087WZ62 844 aa20.86■□□□□ 0.93
TPM1-226ENST00000560959 KLF18A0A0U1RQI7 1052 aa20.86■□□□□ 0.93
TPM1-226ENST00000560959 PAPLNO95428 1278 aa20.86■□□□□ 0.93
TPM1-226ENST00000560959 C1RP00736 705 aa20.86■□□□□ 0.93
TPM1-226ENST00000560959 ADD1P35611 737 aaKnown RBP20.86■□□□□ 0.93
TPM1-226ENST00000560959 DRP2Q13474 957 aa20.86■□□□□ 0.93
TPM1-226ENST00000560959 UGCGQ16739 394 aa20.86■□□□□ 0.93
TPM1-226ENST00000560959 ELMSAN1Q6PJG2 1045 aa20.86■□□□□ 0.93
TPM1-226ENST00000560959 FEZF2Q8TBJ5 459 aa20.86■□□□□ 0.93
TPM1-226ENST00000560959 SLC5A5Q92911 643 aa20.86■□□□□ 0.93
TPM1-226ENST00000560959 FDXACB1Q9BRP7 624 aaPredicted RBP20.86■□□□□ 0.93
TPM1-226ENST00000560959 TMEM175Q9BSA9 504 aa20.86■□□□□ 0.93
TPM1-226ENST00000560959 WDR6Q9NNW5 1121 aaKnown RBP20.86■□□□□ 0.93
TPM1-226ENST00000560959 EPS15L1Q9UBC2 864 aa20.86■□□□□ 0.93
TPM1-226ENST00000560959 DNAJB4Q9UDY4 337 aa20.86■□□□□ 0.93
TPM1-226ENST00000560959 PIN4Q9Y237 131 aaKnown RBP20.86■□□□□ 0.93
TPM1-226ENST00000560959 WDR87Q6ZQQ6 2873 aa20.86■□□□□ 0.93
TPM1-226ENST00000560959 DENND4AQ7Z401 1863 aa20.86■□□□□ 0.93
TPM1-226ENST00000560959 ADAMTS3O15072 1205 aa20.85■□□□□ 0.93
TPM1-226ENST00000560959 PRPF3O43395 683 aaKnown RBP20.85■□□□□ 0.93
TPM1-226ENST00000560959 GAS7O60861 476 aa20.85■□□□□ 0.93
TPM1-226ENST00000560959 MRPL10Q7Z7H8 261 aaKnown RBP20.85■□□□□ 0.93
TPM1-226ENST00000560959 ZNF280BQ86YH2 543 aa20.85■□□□□ 0.93
TPM1-226ENST00000560959 URGCPQ8TCY9 931 aa20.85■□□□□ 0.93
TPM1-226ENST00000560959 TEKT3Q9BXF9 490 aa20.85■□□□□ 0.93
TPM1-226ENST00000560959 INPP5FQ9Y2H2 1132 aa20.85■□□□□ 0.93
TPM1-226ENST00000560959 MEIS3P2A8K0S8 358 aa20.84■□□□□ 0.93
TPM1-226ENST00000560959 EDIL3O43854 480 aa20.84■□□□□ 0.93
TPM1-226ENST00000560959 MAFO75444 373 aaPredicted RBP20.84■□□□□ 0.93
TPM1-226ENST00000560959 STBD1O95210 358 aa20.84■□□□□ 0.93
TPM1-226ENST00000560959 HMGB1P09429 215 aaKnown RBP20.84■□□□□ 0.93
TPM1-226ENST00000560959 PHLDB3Q6NSJ2 640 aa20.84■□□□□ 0.93
TPM1-226ENST00000560959 KCNG4Q8TDN1 519 aa20.84■□□□□ 0.93
TPM1-226ENST00000560959 HDAC7Q8WUI4 952 aa20.84■□□□□ 0.93
TPM1-226ENST00000560959 CCDC136Q96JN2 1154 aa20.84■□□□□ 0.93
TPM1-226ENST00000560959 JPH2Q9BR39 696 aaPredicted RBP20.84■□□□□ 0.93
TPM1-226ENST00000560959 SUCLA2Q9P2R7 463 aaPredicted RBP20.84■□□□□ 0.93
TPM1-226ENST00000560959 FAN1Q9Y2M0 1017 aa20.84■□□□□ 0.93
TPM1-226ENST00000560959 PCDHB2Q9Y5E7 798 aa20.84■□□□□ 0.93
TPM1-226ENST00000560959 CNTNAP2Q9UHC6 1331 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 EP300Q09472 2414 aaPredicted RBP20.83■□□□□ 0.93
TPM1-226ENST00000560959 KRBA1A5PL33 1030 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 N4BP1O75113 896 aaKnown RBP20.83■□□□□ 0.93
TPM1-226ENST00000560959 DDHD2O94830 711 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 SOD2P04179 222 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 SRFP11831 508 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 KRT32Q14532 448 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 LONRF3Q496Y0 759 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 MTERF2Q49AM1 385 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 LRCH2Q5VUJ6 765 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 B3GNT9Q6UX72 402 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 AGMOQ6ZNB7 445 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 CATSPER4Q7RTX7 472 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 SLC44A3Q8N4M1 653 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 RMDN1Q96DB5 314 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 BORCS6Q96GS4 357 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 TCEANC2Q96MN5 208 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 RPS6KC1Q96S38 1066 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 GBP3Q9H0R5 595 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 UNC45AQ9H3U1 944 aa20.83■□□□□ 0.93
TPM1-226ENST00000560959 DMXL1Q9Y485 3027 aa20.83■□□□□ 0.92
TPM1-226ENST00000560959 CCDC195A0A1B0GUA6 201 aa20.82■□□□□ 0.92
TPM1-226ENST00000560959 STK25O00506 426 aa20.82■□□□□ 0.92
TPM1-226ENST00000560959 NARSO43776 548 aaKnown RBP20.82■□□□□ 0.92
TPM1-226ENST00000560959 PSMD10O75832 226 aa20.82■□□□□ 0.92
TPM1-226ENST00000560959 ADH1AP07327 375 aa20.82■□□□□ 0.92
TPM1-226ENST00000560959 ZC3H14Q6PJT7 736 aaKnown RBP20.82■□□□□ 0.92
TPM1-226ENST00000560959 RHPN2Q8IUC4 686 aa20.82■□□□□ 0.92
TPM1-226ENST00000560959 FAM193BQ96PV7 902 aaPredicted RBP20.82■□□□□ 0.92
TPM1-226ENST00000560959 UBN1Q9NPG3 1134 aa20.82■□□□□ 0.92
TPM1-226ENST00000560959 MAN1C1Q9NR34 630 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms