RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 ERMNQ8TAM6 284 aa6.12□□□□□ -1.43
ZEB1-220ENST00000560909 SPATA20Q8TB22 786 aa6.12□□□□□ -1.43
ZEB1-220ENST00000560909 COPS5Q92905 334 aa6.12□□□□□ -1.43
ZEB1-220ENST00000560909 CEP89Q96ST8 783 aa6.12□□□□□ -1.43
ZEB1-220ENST00000560909 C16orf70Q9BSU1 422 aa6.12□□□□□ -1.43
ZEB1-220ENST00000560909 NIFKQ9BYG3 293 aaKnown RBP6.12□□□□□ -1.43
ZEB1-220ENST00000560909 NT5C3AQ9H0P0 336 aa6.12□□□□□ -1.43
ZEB1-220ENST00000560909 ZSWIM4Q9H7M6 989 aa6.12□□□□□ -1.43
ZEB1-220ENST00000560909 PAK6Q9NQU5 681 aaPredicted RBP6.12□□□□□ -1.43
ZEB1-220ENST00000560909 PDLIM7Q9NR12 457 aa6.12□□□□□ -1.43
ZEB1-220ENST00000560909 NDFIP2Q9NV92 336 aa6.12□□□□□ -1.43
ZEB1-220ENST00000560909 FAM13BQ9NYF5 915 aa6.12□□□□□ -1.43
ZEB1-220ENST00000560909 RGL1Q9NZL6 768 aa6.12□□□□□ -1.43
ZEB1-220ENST00000560909 WRAP73Q9P2S5 460 aaPredicted RBP6.12□□□□□ -1.43
ZEB1-220ENST00000560909 DBR1Q9UK59 544 aaKnown RBP6.12□□□□□ -1.43
ZEB1-220ENST00000560909 ZHX1Q9UKY1 873 aaPredicted RBP6.12□□□□□ -1.43
ZEB1-220ENST00000560909 IGSF9BQ9UPX0 1349 aa6.12□□□□□ -1.43
ZEB1-220ENST00000560909 PPME1Q9Y570 386 aa6.12□□□□□ -1.43
ZEB1-220ENST00000560909 MCM3APO60318 1980 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 MYH15Q9Y2K3 1946 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 PLXNA1Q9UIW2 1896 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 ZSWIM8A7E2V4 1837 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 KDM3AQ9Y4C1 1321 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 GOLGA6L4A6NEF3 574 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 HAS3O00219 553 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 POLR2DO15514 142 aaKnown RBP6.11□□□□□ -1.43
ZEB1-220ENST00000560909 DYNC1LI2O43237 492 aaPredicted RBP6.11□□□□□ -1.43
ZEB1-220ENST00000560909 DKC1O60832 514 aaKnown RBP eCLIP6.11□□□□□ -1.43
ZEB1-220ENST00000560909 EYA4O95677 639 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 F2P00734 622 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 INHAP05111 366 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 MYL1P05976 194 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 PLCG1P19174 1290 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 CCND3P30281 292 aaPredicted RBP6.11□□□□□ -1.43
ZEB1-220ENST00000560909 SYKP43405 635 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 LBX1P52954 281 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 SLC12A3P55017 1021 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 KARSQ15046 597 aaKnown RBP6.11□□□□□ -1.43
ZEB1-220ENST00000560909 UGCGQ16739 394 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 LONRF3Q496Y0 759 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 XKR3Q5GH77 459 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 SPECC1Q5M775 1068 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 GJC2Q5T442 439 aaPredicted RBP6.11□□□□□ -1.43
ZEB1-220ENST00000560909 NT5DC1Q5TFE4 455 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 NCAPH2Q6IBW4 605 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 MIS18BP1Q6P0N0 1132 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 MIER3Q7Z3K6 550 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 TLK2Q86UE8 772 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 CCDC60Q8IWA6 550 aaPredicted RBP6.11□□□□□ -1.43
ZEB1-220ENST00000560909 SYT2Q8N9I0 419 aaPredicted RBP6.11□□□□□ -1.43
ZEB1-220ENST00000560909 SNX29Q8TEQ0 813 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 AFG1LQ8WV93 481 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 RAD54LQ92698 747 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 KAT2BQ92831 832 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 KCNN1Q92952 543 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 DYDC2Q96IM9 177 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 SPATA33Q96N06 139 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 UIMC1Q96RL1 719 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 SSBP4Q9BWG4 385 aaPredicted RBP6.11□□□□□ -1.43
ZEB1-220ENST00000560909 SMARCAD1Q9H4L7 1026 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 MLXIPQ9HAP2 919 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 MAGEF1Q9HAY2 307 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 HMX1Q9NP08 348 aaPredicted RBP6.11□□□□□ -1.43
ZEB1-220ENST00000560909 ANKEF1Q9NU02 776 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 DDX19AQ9NUU7 478 aaKnown RBP6.11□□□□□ -1.43
ZEB1-220ENST00000560909 DACT1Q9NYF0 836 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 CCDC39Q9UFE4 941 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 DDX20Q9UHI6 824 aaKnown RBP6.11□□□□□ -1.43
ZEB1-220ENST00000560909 KIAA1217Q5T5P2 1943 aa6.11□□□□□ -1.43
ZEB1-220ENST00000560909 IGKV6-21A0A0C4DH24 114 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 FRMD3A2A2Y4 597 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 ZBTB42B2RXF5 422 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 TRAK2O60296 914 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 LGALS2P05162 132 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 MMP3P08254 477 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 RARBP10826 455 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 PTGS1P23219 599 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 TCF7P36402 384 aaPredicted RBP6.1□□□□□ -1.43
ZEB1-220ENST00000560909 TXLNAP40222 546 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 CCT6AP40227 531 aaKnown RBP6.1□□□□□ -1.43
ZEB1-220ENST00000560909 SARSP49591 514 aaKnown RBP6.1□□□□□ -1.43
ZEB1-220ENST00000560909 CPT1AP50416 773 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 STAT5BP51692 787 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 PSMC6P62333 389 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 ADAM17P78536 824 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 NRG1Q02297 640 aaPredicted RBP6.1□□□□□ -1.43
ZEB1-220ENST00000560909 CTTNQ14247 550 aaKnown RBP6.1□□□□□ -1.43
ZEB1-220ENST00000560909 LBRQ14739 615 aaKnown RBP6.1□□□□□ -1.43
ZEB1-220ENST00000560909 FSCN1Q16658 493 aaKnown RBP6.1□□□□□ -1.43
ZEB1-220ENST00000560909 DGKDQ16760 1214 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 ARSHQ5FYA8 562 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 RRAGBQ5VZM2 374 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 FAM160B1Q5W0V3 765 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 SWSAP1Q6NVH7 229 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 KRBA2Q6ZNG9 492 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 C1orf186Q6ZWK4 172 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 ANO5Q75V66 913 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 OR6J1Q8NGC5 347 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 ATP8B4Q8TF62 1192 aa6.1□□□□□ -1.43
ZEB1-220ENST00000560909 ATP6V0A1Q93050 837 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms