RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 MYBP10242 640 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 LAMP2P13473 410 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 TMOD1P28289 359 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 ZNF76P36508 570 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 SREBF1P36956 1147 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 COL9A3Q14050 684 aaPredicted RBP10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 NOMO2Q5JPE7 1267 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 WWC2Q6AWC2 1192 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 NIPA1Q7RTP0 329 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 PLA2G4DQ86XP0 818 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 RAB11FIP4Q86YS3 637 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 ZNF710Q8N1W2 664 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 GPR161Q8N6U8 529 aaKnown RBP10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 STAMQ92783 540 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 ZNF707Q96C28 371 aaPredicted RBP10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 BORCS6Q96GS4 357 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 RPP25Q9BUL9 199 aaKnown RBP10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 TRAIPQ9BWF2 469 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 GBP3Q9H0R5 595 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 SLC2A4RGQ9NR83 387 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 GABBR1Q9UBS5 961 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 INPP5FQ9Y2H2 1132 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 PCDHA10Q9Y5I2 948 aa10.13□□□□□ -0.79
RABGGTA-217ENST00000560521 ARID2Q68CP9 1835 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 PRR5-ARHGAP8B1AHC4 643 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 ANHXE9PGG2 379 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 IPO5O00410 1097 aaKnown RBP10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 C2CD2LO14523 706 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 ZNF623O75123 536 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 PAPLNO95428 1278 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 ADRB1P08588 477 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 CLK2P49760 499 aaKnown RBP10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 AFF1P51825 1210 aaKnown RBP10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 ARHGAP8P85298 464 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 NUCB1Q02818 461 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 RNASELQ05823 741 aaKnown RBP10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 DRP2Q13474 957 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 HTR4Q13639 388 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 ZNF746Q6NUN9 644 aaPredicted RBP10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 CYP26C1Q6V0L0 522 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 TAS1R1Q7RTX1 841 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 CRYGNQ8WXF5 182 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 RSPH1Q8WYR4 309 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 RTKNQ9BST9 563 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 MRPL17Q9NRX2 175 aaKnown RBP10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 FAM105AQ9NUU6 356 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 FBXO4Q9UKT5 387 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 MTF2Q9Y483 593 aaPredicted RBP10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 CHD8Q9HCK8 2581 aa10.12□□□□□ -0.79
RABGGTA-217ENST00000560521 TICRRQ7Z2Z1 1910 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 CHD6Q8TD26 2715 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 KANSL1LA0AUZ9 987 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 CCDC69A6NI79 296 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 SH2B2O14492 632 aaPredicted RBP10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 NRP1O14786 923 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 SPTLC1O15269 473 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 TEX28O15482 410 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 ZNF862O60290 1169 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 SOD2P04179 222 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 ALDH2P05091 517 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 PSAPP07602 524 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 SPATA31D3P0C874 917 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 NAPAP54920 295 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 GPC5P78333 572 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 CSTF1Q05048 431 aaKnown RBP10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 SNW1Q13573 536 aaKnown RBP10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 TWF2Q6IBS0 349 aaKnown RBP10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 CASC1Q6TDU7 716 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 GLB1LQ6UWU2 654 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 NFXL1Q6ZNB6 911 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 AGMOQ6ZNB7 445 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 SPATA31D4Q6ZUB0 917 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 TMTC3Q6ZXV5 915 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 SMAP1Q8IYB5 467 aaPredicted RBP10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 TMTC2Q8N394 836 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 FANCBQ8NB91 859 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 ZBTB44Q8NCP5 570 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 NLRP7Q8WX94 980 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 ATRIPQ8WXE1 791 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 SMG7Q92540 1137 aaKnown RBP10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 NELL1Q92832 810 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 SCLT1Q96NL6 688 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 RPS6KC1Q96S38 1066 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 ZNF577Q9BSK1 485 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 MTA3Q9BTC8 594 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 DDX23Q9BUQ8 820 aaKnown RBP10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 TBC1D22BQ9NU19 505 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 SPATA6Q9NWH7 488 aaPredicted RBP10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 RALYQ9UKM9 306 aaKnown RBP10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 CDV3Q9UKY7 258 aaKnown RBP10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 FAN1Q9Y2M0 1017 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 NUMBLQ9Y6R0 609 aa10.11□□□□□ -0.79
RABGGTA-217ENST00000560521 CNTNAP5Q8WYK1 1306 aa10.1□□□□□ -0.79
RABGGTA-217ENST00000560521 CNOT1A5YKK6 2376 aaKnown RBP10.1□□□□□ -0.79
RABGGTA-217ENST00000560521 A0A087WZ62 844 aa10.1□□□□□ -0.79
RABGGTA-217ENST00000560521 SMCO2A6NFE2 343 aa10.1□□□□□ -0.79
RABGGTA-217ENST00000560521 ADAMTS3O15072 1205 aa10.1□□□□□ -0.79
RABGGTA-217ENST00000560521 LAMTOR5O43504 91 aa10.1□□□□□ -0.79
RABGGTA-217ENST00000560521 PRC1O43663 620 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms