RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 HOXA2O43364 376 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 HIP1RO75146 1068 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 SSBP05455 408 aaKnown RBP eCLIP15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 CMA1P23946 247 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 SARSP49591 514 aaKnown RBP15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 RAB27AP51159 221 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 SMTNP53814 917 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 AMPD3Q01432 767 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 SPECC1Q5M775 1068 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 RESP18Q5W5W9 173 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 USP49Q70CQ1 688 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 SV2BQ7L1I2 683 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 CATSPER4Q7RTX7 472 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 NPAS4Q8IUM7 802 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 KSR1Q8IVT5 923 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 MYOCDQ8IZQ8 938 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 DEPTORQ8TB45 409 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 ASAP3Q8TDY4 903 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 SPIRE2Q8WWL2 714 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 RAD9AQ99638 391 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 TNMDQ9H2S6 317 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 TMX1Q9H3N1 280 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 USP25Q9UHP3 1055 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 TTC3P53804 2025 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 A0A1W2PQ27 194 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 A0A1W2PQ64 194 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 A0A1W2PQD8 194 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 LRRIQ4A6NIV6 560 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 INO80B-WBP1J3KQ70 363 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 HTRA4P83105 476 aaPredicted RBP15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 DSC3Q14574 896 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 MAPK6Q16659 721 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 TCTN1Q2MV58 587 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 NOTUMQ6P988 496 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 SHC4Q6S5L8 630 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 MAEAQ7L5Y9 396 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 CNNM3Q8NE01 707 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 PLIN2Q99541 437 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 ADAM2Q99965 735 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 ZBED2Q9BTP6 218 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 RUSC1Q9BVN2 902 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 OSBPL7Q9BZF2 842 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 GPRC5CQ9NQ84 441 aa15.44■□□□□ 0.06
PKNOX1-209ENST00000560448 A0A0U1RQF3 1178 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 C9IYK1 514 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 TLL1O43897 1013 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 EOMESO95936 686 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 PLS3P13797 630 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 DNAJB2P25686 324 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 FXR1P51114 621 aaKnown RBP eCLIP15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 ZNF131P52739 623 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 FAM189BP81408 668 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 DEFB103AP81534 67 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 MBTD1Q05BQ5 628 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 MCM6Q14566 821 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 NAALADL2Q58DX5 795 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 APBB1IPQ7Z5R6 666 aaPredicted RBP15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 GPBP1Q86WP2 473 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 CCDC34Q96HJ3 373 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 PBX4Q9BYU1 374 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 GZF1Q9H116 711 aaPredicted RBP15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 TMEM134Q9H6X4 195 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 PARVGQ9HBI0 331 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 TMEM161AQ9NX61 479 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 SEL1LQ9UBV2 794 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 PIN4Q9Y237 131 aaKnown RBP15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 FAM237AA0A1B0GTK4 181 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 TBCAO75347 108 aaKnown RBP15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 KRT18P05783 430 aaKnown RBP15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 MAPK7Q13164 816 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 E2F4Q16254 413 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 DAW1Q8N136 415 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 CRIPAKQ8N1N5 446 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 LINC01599Q8WXQ3 324 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 TIFAQ96CG3 184 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 FZD8Q9H461 694 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 GDPD2Q9HCC8 539 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 KMT5AQ9NQR1 393 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 KBTBD4Q9NVX7 518 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 ARHGAP28Q9P2N2 729 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 KCNH3Q9ULD8 1083 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 LRFN2Q9ULH4 789 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 PCDHB7Q9Y5E2 793 aa15.43■□□□□ 0.06
PKNOX1-209ENST00000560448 CNTNAP2Q9UHC6 1331 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 FSD2A1L4K1 749 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 CARNS1A5YM72 827 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 ACKR2O00590 384 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 ZNF623O75123 536 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 FAM13AO94988 1023 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 MBD3O95983 291 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 MYL1P05976 194 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 MAPTP10636 758 aaKnown RBP15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 NPTX2P47972 431 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 PEX3P56589 373 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 ARSHQ5FYA8 562 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 ZNF697Q5TEC3 545 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 TWF2Q6IBS0 349 aaKnown RBP15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 CNNM4Q6P4Q7 775 aa15.42■□□□□ 0.06
PKNOX1-209ENST00000560448 RTN4RL1Q86UN2 441 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms