RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 CNOT7Q9UIV1 285 aaKnown RBP10.57□□□□□ -0.72
RTF1-206ENST00000560447 HACL1Q9UJ83 578 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 DIS3Q9Y2L1 958 aaKnown RBP10.57□□□□□ -0.72
RTF1-206ENST00000560447 NCANO14594 1321 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 SIP14410 1827 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 EVI5O60447 810 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 EXOC3O60645 756 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 KLRC1P26715 233 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 YWHABP31946 246 aaKnown RBP10.56□□□□□ -0.72
RTF1-206ENST00000560447 SMTNP53814 917 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 HADHBP55084 474 aaKnown RBP10.56□□□□□ -0.72
RTF1-206ENST00000560447 MYL7Q01449 175 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 MTMR2Q13614 643 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 CASP8Q14790 479 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 HSP90B2PQ58FF3 399 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 ARHGEF16Q5VV41 709 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 CCNI2Q6ZMN8 369 aaPredicted RBP10.56□□□□□ -0.72
RTF1-206ENST00000560447 DEFB132Q7Z7B7 95 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 SLFN11Q7Z7L1 901 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 XXYLT1Q8NBI6 393 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 BANK1Q8NDB2 785 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 MCPH1Q8NEM0 835 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 IL31RAQ8NI17 732 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 FAM71BQ8TC56 605 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 NSUN6Q8TEA1 469 aaKnown RBP10.56□□□□□ -0.72
RTF1-206ENST00000560447 TAF4BQ92750 862 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 ATP6V0A1Q93050 837 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 INPP4AQ96PE3 977 aaPredicted RBP10.56□□□□□ -0.72
RTF1-206ENST00000560447 TAAR1Q96RJ0 339 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 NTPCRQ9BSD7 190 aaKnown RBP10.56□□□□□ -0.72
RTF1-206ENST00000560447 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.56□□□□□ -0.72
RTF1-206ENST00000560447 SELENOOQ9BVL4 669 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 MOV10L1Q9BXT6 1211 aaKnown RBP10.56□□□□□ -0.72
RTF1-206ENST00000560447 EPC1Q9H2F5 836 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 RNF146Q9NTX7 359 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 APEX2Q9UBZ4 518 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 ADAMTS1Q9UHI8 967 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 TFR2Q9UP52 801 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 PCDHA10Q9Y5I2 948 aa10.56□□□□□ -0.72
RTF1-206ENST00000560447 ASTN2O75129 1339 aaPredicted RBP10.56□□□□□ -0.72
RTF1-206ENST00000560447 PAPPA2Q9BXP8 1791 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 PTPRFP10586 1907 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 SFI1A8K8P3 1242 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 F8VZ95 297 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 PDE2AO00408 941 aaPredicted RBP10.55□□□□□ -0.72
RTF1-206ENST00000560447 KIAA0391O15091 583 aaKnown RBP10.55□□□□□ -0.72
RTF1-206ENST00000560447 SRGAP2O75044 1071 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 TMEM253P0C7T8 217 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 PTPRAP18433 802 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 OAS2P29728 719 aaKnown RBP10.55□□□□□ -0.72
RTF1-206ENST00000560447 GTF2H1P32780 548 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 NAP1L1P55209 391 aaKnown RBP10.55□□□□□ -0.72
RTF1-206ENST00000560447 TNNC1P63316 161 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 KCNA1Q09470 495 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 CAMK2BQ13554 666 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 COG2Q14746 738 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 KIF22Q14807 665 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 PPP2R5EQ16537 467 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 GNPTABQ3T906 1256 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 ZC2HC1CQ53FD0 456 aaPredicted RBP10.55□□□□□ -0.72
RTF1-206ENST00000560447 MUM1L1Q5H9M0 696 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 SH3D19Q5HYK7 790 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 EMBQ6PCB8 327 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 CPXCR1Q8N123 301 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 ZNF454Q8N9F8 522 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 SLC30A5Q8TAD4 765 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 RBM46Q8TBY0 533 aaKnown RBP10.55□□□□□ -0.72
RTF1-206ENST00000560447 ACTRT1Q8TDG2 376 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 COG1Q8WTW3 980 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 EXOC4Q96A65 974 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 CAPZA3Q96KX2 299 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 SYT11Q9BT88 431 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 INTS2Q9H0H0 1204 aaKnown RBP10.55□□□□□ -0.72
RTF1-206ENST00000560447 HOXC10Q9NYD6 342 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 SUCLA2Q9P2R7 463 aaPredicted RBP10.55□□□□□ -0.72
RTF1-206ENST00000560447 SALL4Q9UJQ4 1053 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 SAMM50Q9Y512 469 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 PPME1Q9Y570 386 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 MYH9P35579 1960 aaKnown RBP10.55□□□□□ -0.72
RTF1-206ENST00000560447 PFASO15067 1338 aa10.55□□□□□ -0.72
RTF1-206ENST00000560447 CCDC188H7C350 402 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 PALMO75781 387 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 PSAPP07602 524 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 NR3C2P08235 984 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 ACTN1P12814 892 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 EIF2AK2P19525 551 aaKnown RBP10.54□□□□□ -0.72
RTF1-206ENST00000560447 CYP2J2P51589 502 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 VAMP7P51809 220 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 EPHB4P54760 987 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 SPP2Q13103 211 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 RPS6KA1Q15418 735 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 SUPT20HL1Q3ZLR7 823 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 EPC2Q52LR7 807 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 NFRKBQ6P4R8 1299 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 SLC30A10Q6XR72 485 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 CATSPERGQ6ZRH7 1159 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 HAUS6Q7Z4H7 955 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 MAP4K3Q8IVH8 894 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 GOLGA6L1Q8N7Z2 621 aa10.54□□□□□ -0.72
RTF1-206ENST00000560447 LRRC57Q8N9N7 239 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms