RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 DACT1Q9NYF0 836 aa12.95□□□□□ -0.34
RABGGTA-216ENST00000560243 KIAA1024Q9UPX6 916 aa12.95□□□□□ -0.34
RABGGTA-216ENST00000560243 MUC3AQ02505 3323 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 VPS37CA5D8V6 355 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 ARHGEF35A5YM69 484 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 LAD1O00515 517 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 PBX3P40426 434 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 PRPHP41219 470 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 KCNQ1P51787 676 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 MRPS5P82675 430 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 MBTD1Q05BQ5 628 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 AMHR2Q16671 573 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 UBXN11Q5T124 520 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 SPOUT1Q5T280 376 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 PADI6Q6TGC4 694 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 DTHD1Q6ZMT9 781 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 KCNK18Q7Z418 384 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 COLGALT1Q8NBJ5 622 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 SPPL3Q8TCT6 385 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 SNX29Q8TEQ0 813 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 BSNDQ8WZ55 320 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 P2RX5Q93086 422 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 TRAIPQ9BWF2 469 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 FAM105AQ9NUU6 356 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 DDX19AQ9NUU7 478 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 RNF216Q9NWF9 866 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 PCDHGC5Q9Y5F6 944 aa12.94□□□□□ -0.34
RABGGTA-216ENST00000560243 E9PMD0 336 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 INO80B-WBP1J3KQ70 363 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 B4GALT5O43286 388 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 TSPAN1O60635 241 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 EOMESO95936 686 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 CYP11B2P19099 503 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 IRS1P35568 1242 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 TFDP1Q14186 410 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 TJAP1Q5JTD0 557 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 HAUS3Q68CZ6 603 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 IFNLR1Q8IU57 520 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 ABI1Q8IZP0 508 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 HLA-CQ95604 372 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 CPB2Q96IY4 423 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 BHMT2Q9H2M3 363 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 PCDHB2Q9Y5E7 798 aa12.93□□□□□ -0.34
RABGGTA-216ENST00000560243 VWA3AA6NCI4 1184 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 LRRIQ4A6NIV6 560 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 K7ELQ4 463 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 HOXA2O43364 376 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 ZNF623O75123 536 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 FGF18O76093 207 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 ERLIN2O94905 339 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 SYT1P21579 422 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 MUTP22033 750 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 GTF2F1P35269 517 aaKnown RBP eCLIP12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 AFF1P51825 1210 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 POU5F1BQ06416 359 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 TIGD5Q53EQ6 642 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 FAM173BQ6P4H8 233 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 AGMOQ6ZNB7 445 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 CDR2LQ86X02 465 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 MCPH1Q8NEM0 835 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 POF1BQ8WVV4 589 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 EIF2AQ9BY44 585 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 RAB34Q9BZG1 259 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 LMAN2LQ9H0V9 348 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 NSUN3Q9H649 340 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 UBE2ZQ9H832 354 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 COG5Q9UP83 839 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 USP20Q9Y2K6 914 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 PCDHB12Q9Y5F1 795 aa12.92□□□□□ -0.34
RABGGTA-216ENST00000560243 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 TTLL13PA6NNM8 815 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 B4GALT3O60512 393 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 OFD1O75665 1012 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 BMP1P13497 986 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 ARF4P18085 180 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 LAG3P18627 525 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 KCNA5P22460 613 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 GRIN1Q05586 938 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 HYAL1Q12794 435 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 ZRSR1Q15695 479 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 NAALADL2Q58DX5 795 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 KRT79Q5XKE5 535 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 KCNT2Q6UVM3 1135 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 BRAPQ7Z569 592 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 MRPL10Q7Z7H8 261 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 ADGRD2Q7Z7M1 963 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 THNSL1Q8IYQ7 743 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 LRRC43Q8N309 656 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 SMG8Q8ND04 991 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 NECAB3Q96P71 396 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 PNMA5Q96PV4 448 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 PLIN2Q99541 437 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 KIFC3Q9BVG8 833 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 RUSC1Q9BVN2 902 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 NFKBIZQ9BYH8 718 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 RNF39Q9H2S5 420 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 AAASQ9NRG9 546 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 INPP5FQ9Y2H2 1132 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 HES2Q9Y543 173 aa12.91□□□□□ -0.34
RABGGTA-216ENST00000560243 C5orf42Q9H799 3197 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms