RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 FAM105AQ9NUU6 356 aa22.82■■□□□ 1.24
CHRNA3-207ENST00000559941 FSCN2O14926 492 aa22.81■■□□□ 1.24
CHRNA3-207ENST00000559941 PPM1AP35813 382 aa22.81■■□□□ 1.24
CHRNA3-207ENST00000559941 NRIP1P48552 1158 aa22.81■■□□□ 1.24
CHRNA3-207ENST00000559941 RAB27AP51159 221 aa22.81■■□□□ 1.24
CHRNA3-207ENST00000559941 ORC2Q13416 577 aaPredicted RBP22.81■■□□□ 1.24
CHRNA3-207ENST00000559941 RBM23Q86U06 439 aaKnown RBP22.81■■□□□ 1.24
CHRNA3-207ENST00000559941 GJD3Q8N144 294 aa22.81■■□□□ 1.24
CHRNA3-207ENST00000559941 FAM184AQ8NB25 1140 aa22.81■■□□□ 1.24
CHRNA3-207ENST00000559941 MINDY3Q9H8M7 445 aa22.81■■□□□ 1.24
CHRNA3-207ENST00000559941 PUF60Q9UHX1 559 aaKnown RBP22.81■■□□□ 1.24
CHRNA3-207ENST00000559941 POTEMA6NI47 508 aa22.8■■□□□ 1.24
CHRNA3-207ENST00000559941 MBTPS2O43462 519 aa22.8■■□□□ 1.24
CHRNA3-207ENST00000559941 XRCC6P12956 609 aaKnown RBP eCLIP22.8■■□□□ 1.24
CHRNA3-207ENST00000559941 NDUFV1P49821 464 aa22.8■■□□□ 1.24
CHRNA3-207ENST00000559941 MXD4Q14582 209 aaPredicted RBP22.8■■□□□ 1.24
CHRNA3-207ENST00000559941 CLUL1Q15846 466 aa22.8■■□□□ 1.24
CHRNA3-207ENST00000559941 RNF149Q8NC42 400 aa22.8■■□□□ 1.24
CHRNA3-207ENST00000559941 LPPQ93052 612 aa22.8■■□□□ 1.24
CHRNA3-207ENST00000559941 EPHX3Q9H6B9 360 aa22.8■■□□□ 1.24
CHRNA3-207ENST00000559941 TLE6Q9H808 572 aa22.8■■□□□ 1.24
CHRNA3-207ENST00000559941 SPG21Q9NZD8 308 aa22.8■■□□□ 1.24
CHRNA3-207ENST00000559941 PRKAG3Q9UGI9 489 aa22.8■■□□□ 1.24
CHRNA3-207ENST00000559941 DGAT1O75907 488 aa22.79■■□□□ 1.24
CHRNA3-207ENST00000559941 PBX3P40426 434 aa22.79■■□□□ 1.24
CHRNA3-207ENST00000559941 RARRES1P49788 294 aa22.79■■□□□ 1.24
CHRNA3-207ENST00000559941 KHSRPQ92945 711 aaKnown RBP eCLIP22.79■■□□□ 1.24
CHRNA3-207ENST00000559941 MSLNLQ96KJ4 702 aa22.79■■□□□ 1.24
CHRNA3-207ENST00000559941 C1QTNF1Q9BXJ1 281 aa22.79■■□□□ 1.24
CHRNA3-207ENST00000559941 CD207Q9UJ71 328 aa22.79■■□□□ 1.24
CHRNA3-207ENST00000559941 SPATA31C1P0DKV0 1188 aa22.78■■□□□ 1.24
CHRNA3-207ENST00000559941 HOXA11P31270 313 aaPredicted RBP22.78■■□□□ 1.24
CHRNA3-207ENST00000559941 KRT17Q04695 432 aa22.78■■□□□ 1.24
CHRNA3-207ENST00000559941 POU5F1BQ06416 359 aa22.78■■□□□ 1.24
CHRNA3-207ENST00000559941 SMAD4Q13485 552 aaKnown RBP22.78■■□□□ 1.24
CHRNA3-207ENST00000559941 ZNF174Q15697 407 aa22.78■■□□□ 1.24
CHRNA3-207ENST00000559941 SMAD2Q15796 467 aaKnown RBP22.78■■□□□ 1.24
CHRNA3-207ENST00000559941 DUSP6Q16828 381 aa22.78■■□□□ 1.24
CHRNA3-207ENST00000559941 SLC39A11Q8N1S5 342 aa22.78■■□□□ 1.24
CHRNA3-207ENST00000559941 PGBD4Q96DM1 585 aa22.78■■□□□ 1.24
CHRNA3-207ENST00000559941 CDCA3Q99618 268 aaPredicted RBP22.78■■□□□ 1.24
CHRNA3-207ENST00000559941 TUFT1Q9NNX1 390 aa22.78■■□□□ 1.24
CHRNA3-207ENST00000559941 CLEC1BQ9P126 229 aa22.78■■□□□ 1.24
CHRNA3-207ENST00000559941 FSD2A1L4K1 749 aa22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 MEIS3P2A8K0S8 358 aa22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 GLP2RO95838 553 aa22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 OR52Z1P0C646 297 aa22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 ARL2P36404 184 aa22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 PTENP60484 403 aa22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 RABEP1Q15276 862 aa22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 PCBP1Q15365 356 aaKnown RBP eCLIP22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 LONRF3Q496Y0 759 aa22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 GLB1LQ6UWU2 654 aa22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 MRPL10Q7Z7H8 261 aaKnown RBP22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 IFNLR1Q8IU57 520 aaPredicted RBP22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 NOSTRINQ8IVI9 506 aa22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 PIGOQ8TEQ8 1089 aa22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 CCDC43Q96MW1 224 aaKnown RBP22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 NGRNQ9NPE2 291 aaKnown RBP22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 PCDHB2Q9Y5E7 798 aa22.77■■□□□ 1.24
CHRNA3-207ENST00000559941 PER2O15055 1255 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 OFD1O75665 1012 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 EYA4O95677 639 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 SSTR3P32745 418 aaPredicted RBP22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 TECP42680 631 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 TRAPPC10P48553 1259 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 ALDH7A1P49419 539 aaKnown RBP22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 BCAR1P56945 870 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 ZP2Q05996 745 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 GNL2Q13823 731 aaKnown RBP22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 TFDP1Q14186 410 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 NOMO2Q5JPE7 1267 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 TTC38Q5R3I4 469 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 UBXN11Q5T124 520 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 PLPP4Q5VZY2 271 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 CATSPER3Q86XQ3 398 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 ADHFE1Q8IWW8 467 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 ASAP3Q8TDY4 903 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 TCF25Q9BQ70 676 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 POLR3CQ9BUI4 534 aaPredicted RBP22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 ENTPD7Q9NQZ7 604 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 C5orf42Q9H799 3197 aa22.76■■□□□ 1.23
CHRNA3-207ENST00000559941 A0A087WWV3 80 aa22.75■■□□□ 1.23
CHRNA3-207ENST00000559941 CARNS1A5YM72 827 aa22.75■■□□□ 1.23
CHRNA3-207ENST00000559941 C19orf67A6NJJ6 358 aa22.75■■□□□ 1.23
CHRNA3-207ENST00000559941 NT5C1B-RDH14C9J2C7 533 aa22.75■■□□□ 1.23
CHRNA3-207ENST00000559941 PI4K2BG5E9Z4 385 aa22.75■■□□□ 1.23
CHRNA3-207ENST00000559941 MED24O75448 989 aa22.75■■□□□ 1.23
CHRNA3-207ENST00000559941 AXLP30530 894 aa22.75■■□□□ 1.23
CHRNA3-207ENST00000559941 COASYQ13057 564 aa22.75■■□□□ 1.23
CHRNA3-207ENST00000559941 CAPSQ13938 189 aa22.75■■□□□ 1.23
CHRNA3-207ENST00000559941 AGMOQ6ZNB7 445 aa22.75■■□□□ 1.23
CHRNA3-207ENST00000559941 TMC7Q7Z402 723 aa22.75■■□□□ 1.23
CHRNA3-207ENST00000559941 TBC1D13Q9NVG8 400 aa22.75■■□□□ 1.23
CHRNA3-207ENST00000559941 NOL7Q9UMY1 257 aaKnown RBP22.75■■□□□ 1.23
CHRNA3-207ENST00000559941 ERLIN2O94905 339 aa22.74■■□□□ 1.23
CHRNA3-207ENST00000559941 GLRA2P23416 452 aa22.74■■□□□ 1.23
CHRNA3-207ENST00000559941 U2AF2P26368 475 aaKnown RBP eCLIP22.74■■□□□ 1.23
CHRNA3-207ENST00000559941 SMRP1Q8NCR6 262 aa22.74■■□□□ 1.23
CHRNA3-207ENST00000559941 ERMNQ8TAM6 284 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms