RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ZNF286BP0CG31 522 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 SPATA31C1P0DKV0 1188 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 CYBAP13498 195 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 CMA1P23946 247 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 MARK3P27448 753 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 CNGA1P29973 690 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 ICAM3P32942 547 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 LONP1P36776 959 aaKnown RBP5.84□□□□□ -1.47
SPG11-220ENST00000559933 CCT6AP40227 531 aaKnown RBP5.84□□□□□ -1.47
SPG11-220ENST00000559933 AFMP43652 599 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 LBX1P52954 281 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 ACTR2P61160 394 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 BEX3Q00994 111 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 ARHGAP1Q07960 439 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 RAD51AP2Q09MP3 1159 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 PPP2R5CQ13362 524 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 ORC2Q13416 577 aaPredicted RBP5.84□□□□□ -1.47
SPG11-220ENST00000559933 PNOCQ13519 176 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 DHX8Q14562 1220 aaKnown RBP5.84□□□□□ -1.47
SPG11-220ENST00000559933 HSDL1Q3SXM5 330 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 GNPTABQ3T906 1256 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 TMEM119Q4V9L6 283 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 NAALADL2Q58DX5 795 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 UTP14CQ5TAP6 766 aaKnown RBP5.84□□□□□ -1.47
SPG11-220ENST00000559933 ARL6IP4Q66PJ3 421 aaKnown RBP5.84□□□□□ -1.47
SPG11-220ENST00000559933 XRRA1Q6P2D8 792 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 CCDC62Q6P9F0 684 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 CCDC73Q6ZRK6 1079 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 MIER3Q7Z3K6 550 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 RAB44Q7Z6P3 723 aaPredicted RBP5.84□□□□□ -1.47
SPG11-220ENST00000559933 CATSPER3Q86XQ3 398 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 CKAP2LQ8IYA6 745 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 SLFN12Q8IYM2 578 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 RASSF8Q8NHQ8 419 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 RAET1EQ8TD07 263 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 BHMTQ93088 406 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 ERO1AQ96HE7 468 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 FAM20AQ96MK3 541 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 SPATA33Q96N06 139 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 PCYT2Q99447 389 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 SDF4Q9BRK5 362 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 LXNQ9BS40 222 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 BLZF1Q9H2G9 400 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 SUV39H2Q9H5I1 410 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 POLD4Q9HCU8 107 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 VTA1Q9NP79 307 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 DISC1Q9NRI5 854 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 DDX19AQ9NUU7 478 aaKnown RBP5.84□□□□□ -1.47
SPG11-220ENST00000559933 SLC9A2Q9UBY0 812 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 DDX41Q9UJV9 622 aaKnown RBP5.84□□□□□ -1.47
SPG11-220ENST00000559933 KCNH3Q9ULD8 1083 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 PCDHA12Q9UN75 941 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 SAMM50Q9Y512 469 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 MORC2Q9Y6X9 1032 aaPredicted RBP5.84□□□□□ -1.47
SPG11-220ENST00000559933 WDR81Q562E7 1941 aa5.84□□□□□ -1.48
SPG11-220ENST00000559933 ARID2Q68CP9 1835 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 NFASCO94856 1347 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 GSTTP1A0A1W2PQM5 241 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 RBM47A0AV96 593 aaKnown RBP5.83□□□□□ -1.48
SPG11-220ENST00000559933 KRBA1A5PL33 1030 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 ADARB2-AS1A8MUL3 147 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 ZNF862O60290 1169 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 ZNF202O95125 648 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 PGK1P00558 417 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 SSBP05455 408 aaKnown RBP eCLIP5.83□□□□□ -1.48
SPG11-220ENST00000559933 SUPT20HL2P0C7V6 817 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 COL8A1P27658 744 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 ADH7P40394 386 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 STAT6P42226 847 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 SYKP43405 635 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 CHMP4BP1P59074 171 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 FAM160A1Q05DH4 1040 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 TTLL4Q14679 1199 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 SUZ12Q15022 739 aaKnown RBP5.83□□□□□ -1.48
SPG11-220ENST00000559933 PRRT3Q5FWE3 981 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 CELF3Q5SZQ8 465 aaKnown RBP5.83□□□□□ -1.48
SPG11-220ENST00000559933 IER5Q5VY09 327 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 KRT79Q5XKE5 535 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 ISM2Q6H9L7 571 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 SWSAP1Q6NVH7 229 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 TLK2Q86UE8 772 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 TEX2Q8IWB9 1127 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 TPH2Q8IWU9 490 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 DHX37Q8IY37 1157 aaKnown RBP5.83□□□□□ -1.48
SPG11-220ENST00000559933 OR6J1Q8NGC5 347 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 PIGOQ8TEQ8 1089 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 SCFD2Q8WU76 684 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 AFG1LQ8WV93 481 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 RIT2Q99578 217 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 GPR20Q99678 358 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 PLVAPQ9BX97 442 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 UBE2OQ9C0C9 1292 aaKnown RBP5.83□□□□□ -1.48
SPG11-220ENST00000559933 ABHD16BQ9H3Z7 469 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 CLSTN2Q9H4D0 955 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 IGFLR1Q9H665 355 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 MLXIPQ9HAP2 919 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 BLOC1S4Q9NUP1 217 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 SLC5A4Q9NY91 659 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 FAM13BQ9NYF5 915 aa5.83□□□□□ -1.48
SPG11-220ENST00000559933 GABBR1Q9UBS5 961 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms