RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 HS2ST1Q7LGA3 356 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 KIAA1328Q86T90 577 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 TLK2Q86UE8 772 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 EHBP1Q8NDI1 1231 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 FIZ1Q96SL8 496 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 LSM14BQ9BX40 385 aaKnown RBP19.46■□□□□ 0.71
SNX1-208ENST00000559844 UNC93B1Q9H1C4 597 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 LARSQ9P2J5 1176 aaKnown RBP19.46■□□□□ 0.71
SNX1-208ENST00000559844 MRFAP1Q9Y605 127 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 A0A0U1RQJ8 604 aa19.45■□□□□ 0.7
SNX1-208ENST00000559844 TGFB1I1O43294 461 aa19.45■□□□□ 0.7
SNX1-208ENST00000559844 RARRES1P49788 294 aa19.45■□□□□ 0.7
SNX1-208ENST00000559844 ARHGAP1Q07960 439 aa19.45■□□□□ 0.7
SNX1-208ENST00000559844 MTFR1Q15390 333 aa19.45■□□□□ 0.7
SNX1-208ENST00000559844 SPA17Q15506 151 aa19.45■□□□□ 0.7
SNX1-208ENST00000559844 ATRIPQ8WXE1 791 aa19.45■□□□□ 0.7
SNX1-208ENST00000559844 MKNK1Q9BUB5 465 aa19.45■□□□□ 0.7
SNX1-208ENST00000559844 IRX2Q9BZI1 471 aaPredicted RBP19.45■□□□□ 0.7
SNX1-208ENST00000559844 POLD4Q9HCU8 107 aa19.45■□□□□ 0.7
SNX1-208ENST00000559844 SLC9A2Q9UBY0 812 aa19.45■□□□□ 0.7
SNX1-208ENST00000559844 DDX20Q9UHI6 824 aaKnown RBP19.45■□□□□ 0.7
SNX1-208ENST00000559844 ZMYM2Q9UBW7 1377 aa19.45■□□□□ 0.7
SNX1-208ENST00000559844 CTAGE9A4FU28 777 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 LRRC53A6NM62 1247 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 KRT86O43790 486 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 DKC1O60832 514 aaKnown RBP eCLIP19.44■□□□□ 0.7
SNX1-208ENST00000559844 RARBP10826 455 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 YWHABP31946 246 aaKnown RBP19.44■□□□□ 0.7
SNX1-208ENST00000559844 MAPK7Q13164 816 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 CCDC155Q8N6L0 562 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 OR6J1Q8NGC5 347 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 SPATA33Q96N06 139 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 TSGA10Q9BZW7 698 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 MCOLN1Q9GZU1 580 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.44■□□□□ 0.7
SNX1-208ENST00000559844 ANKEF1Q9NU02 776 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 CGNQ9P2M7 1197 aaKnown RBP19.44■□□□□ 0.7
SNX1-208ENST00000559844 MYH9P35579 1960 aaKnown RBP19.44■□□□□ 0.7
SNX1-208ENST00000559844 DYNC1LI2O43237 492 aaPredicted RBP19.44■□□□□ 0.7
SNX1-208ENST00000559844 DUSP11O75319 330 aaKnown RBP19.44■□□□□ 0.7
SNX1-208ENST00000559844 AKAP3O75969 853 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 PSMC2P35998 433 aaKnown RBP19.44■□□□□ 0.7
SNX1-208ENST00000559844 LAMC2Q13753 1193 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 SLC35F6Q8N357 371 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 JAKMIP2Q96AA8 810 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 ZNF333Q96JL9 665 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 TELO2Q9Y4R8 837 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 BRCA2P51587 3418 aa19.44■□□□□ 0.7
SNX1-208ENST00000559844 NOP56O00567 594 aaKnown RBP19.43■□□□□ 0.7
SNX1-208ENST00000559844 CLIC2O15247 247 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 CCNE2O96020 404 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 CCL5P13501 91 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 KCNA1Q09470 495 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 MYBPC2Q14324 1141 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 HSDL1Q3SXM5 330 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 ZC2HC1CQ53FD0 456 aaPredicted RBP19.43■□□□□ 0.7
SNX1-208ENST00000559844 SMAP1Q8IYB5 467 aaPredicted RBP19.43■□□□□ 0.7
SNX1-208ENST00000559844 TXLNBQ8N3L3 684 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 SLC17A8Q8NDX2 589 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 EMID1Q96A84 441 aaPredicted RBP19.43■□□□□ 0.7
SNX1-208ENST00000559844 ARMC5Q96C12 935 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 DRC1Q96MC2 740 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 NAPGQ99747 312 aaPredicted RBP19.43■□□□□ 0.7
SNX1-208ENST00000559844 STRA6Q9BX79 667 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 AP5M1Q9H0R1 490 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 GBP3Q9H0R5 595 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 RNF208Q9H0X6 261 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 PDCL3Q9H2J4 239 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 DEF6Q9H4E7 631 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 ARHGAP20Q9P2F6 1191 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 SSU72P8A0A1W2PR75 194 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 EFCAB8A8MWE9 144 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 MSCO60682 206 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 PPP1R37O75864 691 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 NOL4O94818 638 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 MAPK8IP2Q13387 824 aaPredicted RBP19.43■□□□□ 0.7
SNX1-208ENST00000559844 CCDC122Q5T0U0 273 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 SFMBT2Q5VUG0 894 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 DAW1Q8N136 415 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 PDCL2Q8N4E4 241 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 CARD6Q9BX69 1037 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 TMEM206Q9H813 350 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 PLCB1Q9NQ66 1216 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 XPNPEP3Q9NQH7 507 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 Q9Y3F1 56 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 PCDHA10Q9Y5I2 948 aa19.43■□□□□ 0.7
SNX1-208ENST00000559844 LCA5LO95447 670 aa19.42■□□□□ 0.7
SNX1-208ENST00000559844 PLS3P13797 630 aa19.42■□□□□ 0.7
SNX1-208ENST00000559844 VAV2P52735 878 aa19.42■□□□□ 0.7
SNX1-208ENST00000559844 ACTR2P61160 394 aa19.42■□□□□ 0.7
SNX1-208ENST00000559844 POLR2FP61218 127 aaKnown RBP19.42■□□□□ 0.7
SNX1-208ENST00000559844 HSP90AA2PQ14568 343 aaPredicted RBP19.42■□□□□ 0.7
SNX1-208ENST00000559844 AFG1LQ8WV93 481 aa19.42■□□□□ 0.7
SNX1-208ENST00000559844 PAK6Q9NQU5 681 aaPredicted RBP19.42■□□□□ 0.7
SNX1-208ENST00000559844 GUCA1BQ9UMX6 200 aa19.42■□□□□ 0.7
SNX1-208ENST00000559844 K7ENM7 598 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 USO1O60763 962 aaKnown RBP19.41■□□□□ 0.7
SNX1-208ENST00000559844 PGK1P00558 417 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 KIF11P52732 1056 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 IRX5P78411 483 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms