RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 GATMP50440 423 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 ACTR2P61160 394 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 IGBP1P78318 339 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 MRPS6P82932 125 aaKnown RBP6.63□□□□□ -1.35
USP3-215ENST00000559771 TMEM62Q0P6H9 643 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 PLCB4Q15147 1175 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 PTPROQ16827 1216 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 ADCK5Q3MIX3 580 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 WDR81Q562E7 1941 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 CASC1Q6TDU7 716 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 TSHZ1Q6ZSZ6 1077 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 ADGRD2Q7Z7M1 963 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 CRYGNQ8WXF5 182 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 CDHR1Q96JP9 859 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 TCEANC2Q96MN5 208 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 MXRA8Q9BRK3 442 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 SMARCAD1Q9H4L7 1026 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 JPH1Q9HDC5 661 aaPredicted RBP6.63□□□□□ -1.35
USP3-215ENST00000559771 ALG13Q9NP73 1137 aaKnown RBP6.63□□□□□ -1.35
USP3-215ENST00000559771 TMEM260Q9NX78 707 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 CLDND1Q9NY35 253 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 CLEC1BQ9P126 229 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 SLC9A2Q9UBY0 812 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 SEC63Q9UGP8 760 aaKnown RBP6.63□□□□□ -1.35
USP3-215ENST00000559771 PADI3Q9ULW8 664 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 PLAGL2Q9UPG8 496 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 RBM19Q9Y4C8 960 aaKnown RBP6.63□□□□□ -1.35
USP3-215ENST00000559771 PCDHA2Q9Y5H9 948 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 SQORQ9Y6N5 450 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 NFASCO94856 1347 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 IGSF9BQ9UPX0 1349 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 KDM3AQ9Y4C1 1321 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 IGLV3-22A0A075B6J6 115 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 CCDC69A6NI79 296 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 PRR33A8MZF0 331 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 FAM86B1E9PN63 330 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 MEIS1O00470 390 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 MBTPS2O43462 519 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 GLP2RO95838 553 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 MMP1P03956 469 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 ITGB1P05556 798 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 FAM86B2P0C5J1 330 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 CALM1P0DP23 149 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 CALM2P0DP24 149 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 CALM3P0DP25 149 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 CDC27P30260 824 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 ADAM15Q13444 863 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 SMAD2Q15796 467 aaKnown RBP6.62□□□□□ -1.35
USP3-215ENST00000559771 WDR44Q5JSH3 913 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 APOA5Q6Q788 366 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 ABHD15Q6UXT9 468 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 NFXL1Q6ZNB6 911 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 PLPPR4Q7Z2D5 763 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 HEATR3Q7Z4Q2 680 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 MICU3Q86XE3 530 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 ADHFE1Q8IWW8 467 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 TMTC2Q8N394 836 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 SPPL3Q8TCT6 385 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 TMEM40Q8WWA1 233 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 GLG1Q92896 1179 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 MSLNLQ96KJ4 702 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 C11orf84Q9BUA3 381 aaPredicted RBP6.62□□□□□ -1.35
USP3-215ENST00000559771 CELF4Q9BZC1 486 aaKnown RBP6.62□□□□□ -1.35
USP3-215ENST00000559771 FAM49AQ9H0Q0 323 aaPredicted RBP6.62□□□□□ -1.35
USP3-215ENST00000559771 LMAN2LQ9H0V9 348 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 AGO4Q9HCK5 861 aaKnown RBP6.62□□□□□ -1.35
USP3-215ENST00000559771 ERVK-5Q9HDB9 667 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 TIMMDC1Q9NPL8 285 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 RIC8AQ9NPQ8 531 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 HCN2Q9UL51 889 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 PCDHGC5Q9Y5F6 944 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 SLC12A7Q9Y666 1083 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 EVPLQ92817 2033 aa6.62□□□□□ -1.35
USP3-215ENST00000559771 USP34Q70CQ2 3546 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 SMIM35A0A1B0GVV1 85 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 RRN3P2A6NIE6 340 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 SPDYE3A6NKU9 549 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 CSPG5O95196 566 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 ARAFP10398 606 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 SREBF1P36956 1147 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 STAT5BP51692 787 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 RBM10P98175 930 aaKnown RBP6.61□□□□□ -1.35
USP3-215ENST00000559771 BTG3Q14201 252 aaPredicted RBP6.61□□□□□ -1.35
USP3-215ENST00000559771 CLUL1Q15846 466 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 TMEM132AQ24JP5 1023 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 TMEM266Q2M3C6 531 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 TSGA10IPQ3SY00 556 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 CEP55Q53EZ4 464 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 PDXDC2PQ6P474 469 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 MTHFD1LQ6UB35 978 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 NPAS4Q8IUM7 802 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 CCDC60Q8IWA6 550 aaPredicted RBP6.61□□□□□ -1.35
USP3-215ENST00000559771 CMTR2Q8IYT2 770 aaKnown RBP6.61□□□□□ -1.35
USP3-215ENST00000559771 KIAA0319LQ8IZA0 1049 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 KLHL23Q8NBE8 558 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 VN1R2Q8NFZ6 395 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 P2RX5Q93086 422 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 CCDC136Q96JN2 1154 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 UIMC1Q96RL1 719 aa6.61□□□□□ -1.35
USP3-215ENST00000559771 ARHGAP9Q9BRR9 750 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms