RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 MTERF2Q49AM1 385 aa12.48□□□□□ -0.41
HERC1-204ENST00000559715 XKR3Q5GH77 459 aa12.48□□□□□ -0.41
HERC1-204ENST00000559715 BLOC1S2Q6QNY1 142 aa12.48□□□□□ -0.41
HERC1-204ENST00000559715 AGMOQ6ZNB7 445 aa12.48□□□□□ -0.41
HERC1-204ENST00000559715 CENPQQ7L2Z9 268 aaPredicted RBP12.48□□□□□ -0.41
HERC1-204ENST00000559715 DDX53Q86TM3 631 aaKnown RBP12.48□□□□□ -0.41
HERC1-204ENST00000559715 ZNF280BQ86YH2 543 aa12.48□□□□□ -0.41
HERC1-204ENST00000559715 SUGP1Q8IWZ8 645 aaKnown RBP12.48□□□□□ -0.41
HERC1-204ENST00000559715 VPS52Q8N1B4 723 aa12.48□□□□□ -0.41
HERC1-204ENST00000559715 TMEM105Q8N8V8 129 aa12.48□□□□□ -0.41
HERC1-204ENST00000559715 BICD2Q8TD16 824 aa12.48□□□□□ -0.41
HERC1-204ENST00000559715 CASP10Q92851 521 aa12.48□□□□□ -0.41
HERC1-204ENST00000559715 IGSF21Q96ID5 467 aa12.48□□□□□ -0.41
HERC1-204ENST00000559715 PRRX2Q99811 253 aa12.48□□□□□ -0.41
HERC1-204ENST00000559715 MINDY3Q9H8M7 445 aa12.48□□□□□ -0.41
HERC1-204ENST00000559715 PCDHA4Q9UN74 947 aa12.48□□□□□ -0.41
HERC1-204ENST00000559715 PROB1E7EW31 1015 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 SLC37A4O43826 429 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 DDHD2O94830 711 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 ASGR2P07307 311 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 POLGP54098 1239 aaPredicted RBP12.47□□□□□ -0.41
HERC1-204ENST00000559715 LONRF3Q496Y0 759 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 UBXN11Q5T124 520 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 MIER3Q7Z3K6 550 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 MRPL10Q7Z7H8 261 aaKnown RBP12.47□□□□□ -0.41
HERC1-204ENST00000559715 ZDHHC14Q8IZN3 488 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 ABI1Q8IZP0 508 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 DAGLBQ8NCG7 672 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 CCDC148Q8NFR7 591 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 NLRP7Q8WX94 980 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 TEKT3Q9BXF9 490 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 GCOM2Q9BZD3 368 aaPredicted RBP12.47□□□□□ -0.41
HERC1-204ENST00000559715 ZSWIM6Q9HCJ5 1215 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 FAM105AQ9NUU6 356 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 DACT1Q9NYF0 836 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 VAV3Q9UKW4 847 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 SORCS3Q9UPU3 1222 aa12.47□□□□□ -0.41
HERC1-204ENST00000559715 TDRD15B5MCY1 1934 aaKnown RBP12.47□□□□□ -0.41
HERC1-204ENST00000559715 SRGAP2BP0DMP2 458 aa12.46□□□□□ -0.41
HERC1-204ENST00000559715 SLC11A1P49279 550 aa12.46□□□□□ -0.41
HERC1-204ENST00000559715 ALDH7A1P49419 539 aaKnown RBP12.46□□□□□ -0.41
HERC1-204ENST00000559715 NPEPPSP55786 919 aa12.46□□□□□ -0.41
HERC1-204ENST00000559715 CDC42EP1Q00587 391 aa12.46□□□□□ -0.41
HERC1-204ENST00000559715 PTPN14Q15678 1187 aa12.46□□□□□ -0.41
HERC1-204ENST00000559715 TPRNQ4KMQ1 711 aa12.46□□□□□ -0.41
HERC1-204ENST00000559715 NOMO2Q5JPE7 1267 aa12.46□□□□□ -0.41
HERC1-204ENST00000559715 RARS2Q5T160 578 aaKnown RBP12.46□□□□□ -0.41
HERC1-204ENST00000559715 PLA2G4FQ68DD2 849 aa12.46□□□□□ -0.41
HERC1-204ENST00000559715 KIAA1841Q6NSI8 718 aa12.46□□□□□ -0.41
HERC1-204ENST00000559715 MOXD1Q6UVY6 613 aa12.46□□□□□ -0.41
HERC1-204ENST00000559715 ZNF410Q86VK4 478 aa12.46□□□□□ -0.41
HERC1-204ENST00000559715 NECTIN4Q96NY8 510 aa12.46□□□□□ -0.41
HERC1-204ENST00000559715 LARP6Q9BRS8 491 aaKnown RBP12.46□□□□□ -0.41
HERC1-204ENST00000559715 MRPL9Q9BYD2 267 aaKnown RBP12.46□□□□□ -0.41
HERC1-204ENST00000559715 DHX33Q9H6R0 707 aaKnown RBP12.46□□□□□ -0.41
HERC1-204ENST00000559715 KCNMB3Q9NPA1 279 aa12.46□□□□□ -0.41
HERC1-204ENST00000559715 SUCLA2Q9P2R7 463 aaPredicted RBP12.46□□□□□ -0.41
HERC1-204ENST00000559715 SEPT9Q9UHD8 586 aaPredicted RBP12.46□□□□□ -0.41
HERC1-204ENST00000559715 CEP250Q9BV73 2442 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 H0Y858 1186 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 GALR2O43603 387 aaPredicted RBP12.45□□□□□ -0.42
HERC1-204ENST00000559715 N4BP1O75113 896 aaKnown RBP12.45□□□□□ -0.42
HERC1-204ENST00000559715 ZC3H11AO75152 810 aaKnown RBP eCLIP12.45□□□□□ -0.42
HERC1-204ENST00000559715 MTHFRP42898 656 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 NUBP1P53384 320 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 NLRP5P59047 1200 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 FGD1P98174 961 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 SPIRE1Q08AE8 756 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 PPP2R5CQ13362 524 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 RUFY3Q7L099 469 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 RHPN2Q8IUC4 686 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 UBALD2Q8IYN6 164 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 RNF168Q8IYW5 571 aaPredicted RBP12.45□□□□□ -0.42
HERC1-204ENST00000559715 BLIDQ8IZY5 108 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 HAS1Q92839 578 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 TMEM169Q96HH4 297 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 AGPAT5Q9NUQ2 364 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 LIMD1Q9UGP4 676 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 USTQ9Y2C2 406 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 NR2E1Q9Y466 385 aa12.45□□□□□ -0.42
HERC1-204ENST00000559715 OTOGLQ3ZCN5 2332 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.44□□□□□ -0.42
HERC1-204ENST00000559715 DDX11L8A8MPP1 907 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 ZBTB39O15060 712 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 ST18O60284 1047 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 DTNBO60941 627 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 PAPLNO95428 1278 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 CNPP09543 421 aaKnown RBP12.44□□□□□ -0.42
HERC1-204ENST00000559715 NPR3P17342 541 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 CLCN4P51793 760 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 MTMR3Q13615 1198 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 TWF2Q6IBS0 349 aaKnown RBP12.44□□□□□ -0.42
HERC1-204ENST00000559715 CES5AQ6NT32 575 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 POTEGQ6S5H5 508 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 TAS1R1Q7RTX1 841 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 GPR149Q86SP6 731 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 SMG8Q8ND04 991 aaKnown RBP12.44□□□□□ -0.42
HERC1-204ENST00000559715 PRPF31Q8WWY3 499 aaKnown RBP12.44□□□□□ -0.42
HERC1-204ENST00000559715 RSPH1Q8WYR4 309 aa12.44□□□□□ -0.42
HERC1-204ENST00000559715 ZNF274Q96GC6 653 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms