RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 SLFN13Q68D06 897 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 IGFL4Q6B9Z1 124 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 IQSEC1Q6DN90 963 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 KLHDC10Q6PID8 442 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 FAM177A1Q8N128 213 aaPredicted RBP4.63□□□□□ -1.67
CASC4-210ENST00000559550 ATL2Q8NHH9 583 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 WDR92Q96MX6 357 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 NOL10Q9BSC4 688 aaKnown RBP4.63□□□□□ -1.67
CASC4-210ENST00000559550 TMX1Q9H3N1 280 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 SEC61A2Q9H9S3 476 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 POLR3BQ9NW08 1133 aaPredicted RBP4.63□□□□□ -1.67
CASC4-210ENST00000559550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.63□□□□□ -1.67
CASC4-210ENST00000559550 USP18Q9UMW8 372 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 OAZ3Q9UMX2 235 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 VWA7Q9Y334 891 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 PCDHB6Q9Y5E3 794 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 ST20-MTHFSA0A0A6YYL1 179 aa4.62□□□□□ -1.67
CASC4-210ENST00000559550 PATE3B3GLJ2 98 aa4.62□□□□□ -1.67
CASC4-210ENST00000559550 NPIPB8E9PQR5 432 aa4.62□□□□□ -1.67
CASC4-210ENST00000559550 LPLP06858 475 aa4.62□□□□□ -1.67
CASC4-210ENST00000559550 SELENOPP49908 381 aa4.62□□□□□ -1.67
CASC4-210ENST00000559550 CDKN1CP49918 316 aaPredicted RBP4.62□□□□□ -1.67
CASC4-210ENST00000559550 DUSP8Q13202 625 aa4.62□□□□□ -1.67
CASC4-210ENST00000559550 SAFB2Q14151 953 aaKnown RBP eCLIP4.62□□□□□ -1.67
CASC4-210ENST00000559550 ZNF568Q3ZCX4 644 aa4.62□□□□□ -1.67
CASC4-210ENST00000559550 GAREM2Q75VX8 874 aa4.62□□□□□ -1.67
CASC4-210ENST00000559550 CLEC14AQ86T13 490 aa4.62□□□□□ -1.67
CASC4-210ENST00000559550 SPATS2Q86XZ4 545 aaKnown RBP4.62□□□□□ -1.67
CASC4-210ENST00000559550 SLC41A1Q8IVJ1 513 aa4.62□□□□□ -1.67
CASC4-210ENST00000559550 EAF2Q96CJ1 260 aaPredicted RBP4.62□□□□□ -1.67
CASC4-210ENST00000559550 FDXACB1Q9BRP7 624 aaPredicted RBP4.62□□□□□ -1.67
CASC4-210ENST00000559550 AGO3Q9H9G7 860 aaKnown RBP4.62□□□□□ -1.67
CASC4-210ENST00000559550 ATP8A1Q9Y2Q0 1164 aa4.62□□□□□ -1.67
CASC4-210ENST00000559550 NUMBLQ9Y6R0 609 aa4.62□□□□□ -1.67
CASC4-210ENST00000559550 PHLDB1Q86UU1 1377 aa4.62□□□□□ -1.67
CASC4-210ENST00000559550 MUSKO15146 869 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 CPEP16870 476 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 ADCY7P51828 1080 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 SCAND1P57086 179 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 NANOS3P60323 173 aaKnown RBP4.61□□□□□ -1.67
CASC4-210ENST00000559550 ATP2C1P98194 919 aaPredicted RBP4.61□□□□□ -1.67
CASC4-210ENST00000559550 PPARAQ07869 468 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 RNF219Q5W0B1 726 aaPredicted RBP4.61□□□□□ -1.67
CASC4-210ENST00000559550 TCTN3Q6NUS6 607 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 TAX1BP1Q86VP1 789 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 GPR135Q8IZ08 494 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 CDYL2Q8N8U2 506 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 TGFBRAP1Q8WUH2 860 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 PLA2G12BQ9BX93 195 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 TRIM8Q9BZR9 551 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 IKZF4Q9H2S9 585 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 KCTD10Q9H3F6 313 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 DEF6Q9H4E7 631 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 C14orf119Q9NWQ9 140 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 PUF60Q9UHX1 559 aaKnown RBP4.61□□□□□ -1.67
CASC4-210ENST00000559550 PRSS50Q9UI38 385 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 EDARQ9UNE0 448 aa4.61□□□□□ -1.67
CASC4-210ENST00000559550 RBM8AQ9Y5S9 174 aaKnown RBP4.61□□□□□ -1.67
CASC4-210ENST00000559550 WDR33Q9C0J8 1336 aaKnown RBP4.61□□□□□ -1.67
CASC4-210ENST00000559550 FOXS1O43638 330 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 CDC14BO60729 498 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 H2AFYO75367 372 aaKnown RBP4.6□□□□□ -1.67
CASC4-210ENST00000559550 SEC24DO94855 1032 aaPredicted RBP4.6□□□□□ -1.67
CASC4-210ENST00000559550 GAAP10253 952 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 CR2P20023 1033 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 CDK11BP21127 795 aaKnown RBP4.6□□□□□ -1.67
CASC4-210ENST00000559550 ENPP1P22413 925 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 EVA1CP58658 441 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 ERVK-21P61565 698 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 ADAM8P78325 824 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 CD69Q07108 199 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 TCIRG1Q13488 830 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 FSCN1Q16658 493 aaKnown RBP4.6□□□□□ -1.67
CASC4-210ENST00000559550 MIIPQ5JXC2 388 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 CIR1Q86X95 450 aaPredicted RBP4.6□□□□□ -1.67
CASC4-210ENST00000559550 AMER2Q8N7J2 671 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 PRPF38AQ8NAV1 312 aaKnown RBP4.6□□□□□ -1.67
CASC4-210ENST00000559550 GIMAP8Q8ND71 665 aaPredicted RBP4.6□□□□□ -1.67
CASC4-210ENST00000559550 PIK3C3Q8NEB9 887 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 PPP1R14CQ8TAE6 165 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 LMBR1Q8WVP7 490 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 GAB3Q8WWW8 586 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 GCDHQ92947 438 aaPredicted RBP4.6□□□□□ -1.67
CASC4-210ENST00000559550 GFM2Q969S9 779 aaKnown RBP4.6□□□□□ -1.67
CASC4-210ENST00000559550 AHCYL2Q96HN2 611 aaKnown RBP4.6□□□□□ -1.67
CASC4-210ENST00000559550 GPATCH3Q96I76 525 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 HIST1H2AHQ96KK5 128 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 CEP89Q96ST8 783 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 GPHA2Q96T91 129 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 HIST1H2AJQ99878 128 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 OSBPL6Q9BZF3 934 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 C12orf65Q9H3J6 166 aaKnown RBP4.6□□□□□ -1.67
CASC4-210ENST00000559550 PCDH12Q9NPG4 1184 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 EVLQ9UI08 416 aaPredicted RBP4.6□□□□□ -1.67
CASC4-210ENST00000559550 MCM8Q9UJA3 840 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 SYNPO2Q9UMS6 1093 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 COL4A3BPQ9Y5P4 624 aa4.6□□□□□ -1.67
CASC4-210ENST00000559550 GOLGA8AA7E2F4 631 aa4.59□□□□□ -1.67
CASC4-210ENST00000559550 GOLGA8BA8MQT2 603 aa4.59□□□□□ -1.67
CASC4-210ENST00000559550 SLC26A4O43511 780 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms