RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 EIF4E1BA6NMX2 242 aaKnown RBP11.01□□□□□ -0.65
SMAD3-211ENST00000559460 SRRM3A6NNA2 597 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-211ENST00000559460 GPR32O75388 356 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 MX1P20591 662 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 EIF4BP23588 611 aaKnown RBP11.01□□□□□ -0.65
SMAD3-211ENST00000559460 NLRP11P59045 1033 aaKnown RBP11.01□□□□□ -0.65
SMAD3-211ENST00000559460 FOXC1Q12948 553 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 MTAPQ13126 283 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 PARM1Q6UWI2 310 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 HDAC7Q8WUI4 952 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 FGF14Q92915 247 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 CLDN23Q96B33 292 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 FAM227BQ96M60 508 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 CNNM2Q9H8M5 875 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 JADE2Q9NQC1 790 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 TBC1D13Q9NVG8 400 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 ZSWIM5Q9P217 1185 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 TCEAL9Q9UHQ7 104 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 CDH7Q9ULB5 785 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 CEP131Q9UPN4 1083 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 UBIAD1Q9Y5Z9 338 aa11.01□□□□□ -0.65
SMAD3-211ENST00000559460 ANKRD11Q6UB99 2663 aaPredicted RBP11□□□□□ -0.65
SMAD3-211ENST00000559460 A0A0D9SFI3 127 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 ERICH2A1L162 156 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 PIK3CDO00329 1044 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 KCNK5O95279 499 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 CNR2P34972 360 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 SLC11A1P49279 550 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 LONRF3Q496Y0 759 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 TWF2Q6IBS0 349 aaKnown RBP11□□□□□ -0.65
SMAD3-211ENST00000559460 PSAPL1Q6NUJ1 521 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 BCL7CQ8WUZ0 217 aaPredicted RBP11□□□□□ -0.65
SMAD3-211ENST00000559460 NLRP7Q8WX94 980 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 ZCCHC14Q8WYQ9 949 aaKnown RBP11□□□□□ -0.65
SMAD3-211ENST00000559460 RPS6KC1Q96S38 1066 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 ADAM33Q9BZ11 813 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 PRKD2Q9BZL6 878 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 NT5C3AQ9H0P0 336 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 ZNF302Q9NR11 478 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 NDRG2Q9UN36 371 aaKnown RBP11□□□□□ -0.65
SMAD3-211ENST00000559460 FAN1Q9Y2M0 1017 aa11□□□□□ -0.65
SMAD3-211ENST00000559460 FASNP49327 2511 aaKnown RBP11□□□□□ -0.65
SMAD3-211ENST00000559460 MEIS2O14770 477 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 MAGEB2O15479 319 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 TEX28O15482 410 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 C22orf31O95567 290 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 SOD2P04179 222 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 ALDH2P05091 517 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 SPATA31D3P0C874 917 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 GLUD2P49448 558 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 CLCN3P51790 818 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 GRM4Q14833 912 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 IMMTQ16891 758 aaKnown RBP10.99□□□□□ -0.65
SMAD3-211ENST00000559460 SPATA31D4Q6ZUB0 917 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 TRMT1LQ7Z2T5 733 aaKnown RBP10.99□□□□□ -0.65
SMAD3-211ENST00000559460 ZNF598Q86UK7 904 aaKnown RBP10.99□□□□□ -0.65
SMAD3-211ENST00000559460 ZNF589Q86UQ0 364 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-211ENST00000559460 PGBD4Q96DM1 585 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 RRP36Q96EU6 259 aaKnown RBP10.99□□□□□ -0.65
SMAD3-211ENST00000559460 RPP25Q9BUL9 199 aaKnown RBP10.99□□□□□ -0.65
SMAD3-211ENST00000559460 DCTPP1Q9H773 170 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 KCNH7Q9NS40 1196 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 DNAJB4Q9UDY4 337 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 NFASCO94856 1347 aa10.99□□□□□ -0.65
SMAD3-211ENST00000559460 DDX39AO00148 427 aaKnown RBP10.98□□□□□ -0.65
SMAD3-211ENST00000559460 MAN2B1O00754 1011 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 GAS2O43903 313 aaKnown RBP10.98□□□□□ -0.65
SMAD3-211ENST00000559460 PHKA2P46019 1235 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 RAB27AP51159 221 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 NOVA1P51513 510 aaKnown RBP10.98□□□□□ -0.65
SMAD3-211ENST00000559460 ZNF252P-AS1Q0IIN9 211 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 STPG1Q5TH74 334 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 MIS18BP1Q6P0N0 1132 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 PALB2Q86YC2 1186 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 LPPQ93052 612 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 ZNF707Q96C28 371 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-211ENST00000559460 KXD1Q9BQD3 176 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 TMEM175Q9BSA9 504 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 HERC2P3Q9BVR0 1158 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 VN1R3Q9BXE9 311 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 CHRDQ9H2X0 955 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 PSTPIP2Q9H939 334 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 CHST12Q9NRB3 414 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 ANKFY1Q9P2R3 1169 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 POLIQ9UNA4 740 aa10.98□□□□□ -0.65
SMAD3-211ENST00000559460 CYTH3O43739 400 aa10.97□□□□□ -0.65
SMAD3-211ENST00000559460 LILRB3O75022 631 aa10.97□□□□□ -0.65
SMAD3-211ENST00000559460 NR1I2O75469 434 aa10.97□□□□□ -0.65
SMAD3-211ENST00000559460 ZIC2O95409 532 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-211ENST00000559460 DARSP14868 501 aaKnown RBP10.97□□□□□ -0.65
SMAD3-211ENST00000559460 FGFR4P22455 802 aa10.97□□□□□ -0.65
SMAD3-211ENST00000559460 SFPQP23246 707 aaKnown RBP eCLIP10.97□□□□□ -0.651e-6■■■□□ 17.1
SMAD3-211ENST00000559460 CXCL12P48061 93 aa10.97□□□□□ -0.65
SMAD3-211ENST00000559460 CREMQ03060 361 aa10.97□□□□□ -0.65
SMAD3-211ENST00000559460 NMIQ13287 307 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-211ENST00000559460 SF3A2Q15428 464 aaKnown RBP10.97□□□□□ -0.65
SMAD3-211ENST00000559460 LIN9Q5TKA1 542 aa10.97□□□□□ -0.65
SMAD3-211ENST00000559460 EFCAB12Q6NXP0 572 aa10.97□□□□□ -0.65
SMAD3-211ENST00000559460 GRASPQ7Z6J2 395 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-211ENST00000559460 GLYCTKQ8IVS8 523 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms