RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 FERMT3Q86UX7 667 aa19.8■□□□□ 0.76
TPM1-218ENST00000559281 FOXP1Q9H334 677 aaPredicted RBP19.8■□□□□ 0.76
TPM1-218ENST00000559281 NGRNQ9NPE2 291 aaKnown RBP19.8■□□□□ 0.76
TPM1-218ENST00000559281 FAM105AQ9NUU6 356 aa19.8■□□□□ 0.76
TPM1-218ENST00000559281 HCSTQ9UBK5 93 aa19.8■□□□□ 0.76
TPM1-218ENST00000559281 NLRC5Q86WI3 1866 aa19.79■□□□□ 0.76
TPM1-218ENST00000559281 LOXHD1Q8IVV2 1947 aa19.79■□□□□ 0.76
TPM1-218ENST00000559281 LINC01565O15544 149 aa19.79■□□□□ 0.76
TPM1-218ENST00000559281 DGAT1O75907 488 aa19.79■□□□□ 0.76
TPM1-218ENST00000559281 ATF7P17544 494 aaPredicted RBP19.79■□□□□ 0.76
TPM1-218ENST00000559281 MCM7P33993 719 aa19.79■□□□□ 0.76
TPM1-218ENST00000559281 ERVFC1P60507 584 aa19.79■□□□□ 0.76
TPM1-218ENST00000559281 ORC2Q13416 577 aaPredicted RBP19.79■□□□□ 0.76
TPM1-218ENST00000559281 SMAD4Q13485 552 aaKnown RBP19.79■□□□□ 0.76
TPM1-218ENST00000559281 TFDP1Q14186 410 aa19.79■□□□□ 0.76
TPM1-218ENST00000559281 SMAD2Q15796 467 aaKnown RBP19.79■□□□□ 0.76
TPM1-218ENST00000559281 CLUL1Q15846 466 aa19.79■□□□□ 0.76
TPM1-218ENST00000559281 RNF149Q8NC42 400 aa19.79■□□□□ 0.76
TPM1-218ENST00000559281 EPHX3Q9H6B9 360 aa19.79■□□□□ 0.76
TPM1-218ENST00000559281 BMP2KQ9NSY1 1161 aaPredicted RBP19.79■□□□□ 0.76
TPM1-218ENST00000559281 AGPAT5Q9NUQ2 364 aa19.79■□□□□ 0.76
TPM1-218ENST00000559281 ZBTB39O15060 712 aa19.78■□□□□ 0.76
TPM1-218ENST00000559281 MBTPS2O43462 519 aa19.78■□□□□ 0.76
TPM1-218ENST00000559281 TBX10O75333 385 aa19.78■□□□□ 0.76
TPM1-218ENST00000559281 SRGAP2BP0DMP2 458 aa19.78■□□□□ 0.76
TPM1-218ENST00000559281 C8orf34Q49A92 452 aa19.78■□□□□ 0.76
TPM1-218ENST00000559281 TMC7Q7Z402 723 aa19.78■□□□□ 0.76
TPM1-218ENST00000559281 ADHFE1Q8IWW8 467 aa19.78■□□□□ 0.76
TPM1-218ENST00000559281 FBXO18Q8NFZ0 1043 aa19.78■□□□□ 0.76
TPM1-218ENST00000559281 POP1Q99575 1024 aaKnown RBP19.78■□□□□ 0.76
TPM1-218ENST00000559281 TCF25Q9BQ70 676 aa19.78■□□□□ 0.76
TPM1-218ENST00000559281 CD320Q9NPF0 282 aa19.78■□□□□ 0.76
TPM1-218ENST00000559281 ENTPD7Q9NQZ7 604 aa19.78■□□□□ 0.76
TPM1-218ENST00000559281 MUC3AQ02505 3323 aa19.78■□□□□ 0.76
TPM1-218ENST00000559281 PI4K2BG5E9Z4 385 aa19.77■□□□□ 0.76
TPM1-218ENST00000559281 FSCN2O14926 492 aa19.77■□□□□ 0.76
TPM1-218ENST00000559281 PER2O15055 1255 aa19.77■□□□□ 0.76
TPM1-218ENST00000559281 ERLIN2O94905 339 aa19.77■□□□□ 0.76
TPM1-218ENST00000559281 EYA4O95677 639 aa19.77■□□□□ 0.76
TPM1-218ENST00000559281 ALADP13716 330 aa19.77■□□□□ 0.76
TPM1-218ENST00000559281 RNASELQ05823 741 aaKnown RBP19.77■□□□□ 0.76
TPM1-218ENST00000559281 POU5F1BQ06416 359 aa19.77■□□□□ 0.76
TPM1-218ENST00000559281 NOMO2Q5JPE7 1267 aa19.77■□□□□ 0.76
TPM1-218ENST00000559281 CNNM3Q8NE01 707 aa19.77■□□□□ 0.76
TPM1-218ENST00000559281 ERMNQ8TAM6 284 aa19.77■□□□□ 0.76
TPM1-218ENST00000559281 MSLNLQ96KJ4 702 aa19.77■□□□□ 0.76
TPM1-218ENST00000559281 PCDHB2Q9Y5E7 798 aa19.77■□□□□ 0.76
TPM1-218ENST00000559281 WNT7AO00755 349 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 COL9A1P20849 921 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 AXLP30530 894 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 RARRES1P49788 294 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 BCAR1P56945 870 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 ZP2Q05996 745 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 COASYQ13057 564 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 DUSP6Q16828 381 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 PLPP4Q5VZY2 271 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 SLC39A11Q8N1S5 342 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 LPPQ93052 612 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 TMEM169Q96HH4 297 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 KIF2CQ99661 725 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 TMEM60Q9H2L4 133 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 TUFT1Q9NNX1 390 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 CLEC1BQ9P126 229 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 KANSL3Q9P2N6 904 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 NOL7Q9UMY1 257 aaKnown RBP19.76■□□□□ 0.75
TPM1-218ENST00000559281 PCDHGC5Q9Y5F6 944 aa19.76■□□□□ 0.75
TPM1-218ENST00000559281 OFD1O75665 1012 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 PBX3P40426 434 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 TECP42680 631 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 TRAPPC10P48553 1259 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 PTENP60484 403 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 ZNF174Q15697 407 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 LONRF3Q496Y0 759 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 TMEM31Q5JXX7 168 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 MRPL10Q7Z7H8 261 aaKnown RBP19.75■□□□□ 0.75
TPM1-218ENST00000559281 NOSTRINQ8IVI9 506 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 URGCPQ8TCY9 931 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 PIGOQ8TEQ8 1089 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 NACC1Q96RE7 527 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 MINDY3Q9H8M7 445 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 UPF2Q9HAU5 1272 aaKnown RBP19.75■□□□□ 0.75
TPM1-218ENST00000559281 UBN1Q9NPG3 1134 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 XPNPEP1Q9NQW7 623 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 INPP5FQ9Y2H2 1132 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 KIF3AQ9Y496 699 aa19.75■□□□□ 0.75
TPM1-218ENST00000559281 POTEMA6NI47 508 aa19.74■□□□□ 0.75
TPM1-218ENST00000559281 C19orf67A6NJJ6 358 aa19.74■□□□□ 0.75
TPM1-218ENST00000559281 INO80B-WBP1J3KQ70 363 aa19.74■□□□□ 0.75
TPM1-218ENST00000559281 ST18O60284 1047 aa19.74■□□□□ 0.75
TPM1-218ENST00000559281 ZC3H11AO75152 810 aaKnown RBP eCLIP19.74■□□□□ 0.75
TPM1-218ENST00000559281 OR52Z1P0C646 297 aa19.74■□□□□ 0.75
TPM1-218ENST00000559281 HOXA11P31270 313 aaPredicted RBP19.74■□□□□ 0.75
TPM1-218ENST00000559281 ARL2P36404 184 aa19.74■□□□□ 0.75
TPM1-218ENST00000559281 SMC1AQ14683 1233 aaKnown RBP19.74■□□□□ 0.75
TPM1-218ENST00000559281 RABEP1Q15276 862 aa19.74■□□□□ 0.75
TPM1-218ENST00000559281 TTC38Q5R3I4 469 aa19.74■□□□□ 0.75
TPM1-218ENST00000559281 IFNLR1Q8IU57 520 aaPredicted RBP19.74■□□□□ 0.75
TPM1-218ENST00000559281 TMEM87AQ8NBN3 555 aa19.74■□□□□ 0.75
TPM1-218ENST00000559281 SMRP1Q8NCR6 262 aa19.74■□□□□ 0.75
TPM1-218ENST00000559281 CCDC51Q96ER9 411 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms