RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 VAV3Q9UKW4 847 aa17.09■□□□□ 0.33
IRF9-204ENST00000559229 WDR81Q562E7 1941 aa17.08■□□□□ 0.33
IRF9-204ENST00000559229 TBX3O15119 743 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 CLASP2O75122 1294 aaKnown RBP17.08■□□□□ 0.32
IRF9-204ENST00000559229 ZC3H11AO75152 810 aaKnown RBP eCLIP17.08■□□□□ 0.32
IRF9-204ENST00000559229 OFD1O75665 1012 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 XBP1P17861 261 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 POLGP54098 1239 aaPredicted RBP17.08■□□□□ 0.32
IRF9-204ENST00000559229 NPEPPSP55786 919 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 SCRN1Q12765 414 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 NOMO2Q5JPE7 1267 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 PLA2G4FQ68DD2 849 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 CES5AQ6NT32 575 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 DDX53Q86TM3 631 aaKnown RBP17.08■□□□□ 0.32
IRF9-204ENST00000559229 VPS52Q8N1B4 723 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 SLC7A3Q8WY07 619 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 LPPQ93052 612 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 CEP170P1Q96L14 293 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 SLKQ9H2G2 1235 aaPredicted RBP17.08■□□□□ 0.32
IRF9-204ENST00000559229 NR2E1Q9Y466 385 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 COL4A3BPQ9Y5P4 624 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 IRAK3Q9Y616 596 aa17.08■□□□□ 0.32
IRF9-204ENST00000559229 GALTP07902 379 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 GIT2Q14161 759 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 PTPN21Q16825 1174 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 LONRF3Q496Y0 759 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 TMEM173Q86WV6 379 aaPredicted RBP17.07■□□□□ 0.32
IRF9-204ENST00000559229 SUGP1Q8IWZ8 645 aaKnown RBP17.07■□□□□ 0.32
IRF9-204ENST00000559229 C4orf19Q8IY42 314 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 FBXL6Q8N531 539 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 ZNF579Q8NAF0 562 aaKnown RBP17.07■□□□□ 0.32
IRF9-204ENST00000559229 PRPF31Q8WWY3 499 aaKnown RBP17.07■□□□□ 0.32
IRF9-204ENST00000559229 HAS1Q92839 578 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 PGBD4Q96DM1 585 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 ASIC4Q96FT7 647 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 IGSF21Q96ID5 467 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 NECTIN4Q96NY8 510 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 NAP1L4Q99733 375 aaKnown RBP17.07■□□□□ 0.32
IRF9-204ENST00000559229 PRRX2Q99811 253 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 ZBP1Q9H171 429 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 DHX33Q9H6R0 707 aaKnown RBP17.07■□□□□ 0.32
IRF9-204ENST00000559229 NRDE2Q9H7Z3 1164 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 AGPAT5Q9NUQ2 364 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 TBC1D13Q9NVG8 400 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 WRAP73Q9P2S5 460 aaPredicted RBP17.07■□□□□ 0.32
IRF9-204ENST00000559229 ZDBF2Q9HCK1 2354 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 USP34Q70CQ2 3546 aa17.07■□□□□ 0.32
IRF9-204ENST00000559229 STK36Q9NRP7 1315 aa17.06■□□□□ 0.32
IRF9-204ENST00000559229 MEIS3P2A8K0S8 358 aa17.06■□□□□ 0.32
IRF9-204ENST00000559229 CCNT1O60563 726 aaKnown RBP17.06■□□□□ 0.32
IRF9-204ENST00000559229 CTSAP10619 480 aa17.06■□□□□ 0.32
IRF9-204ENST00000559229 CA8P35219 290 aa17.06■□□□□ 0.32
IRF9-204ENST00000559229 RFC5P40937 340 aa17.06■□□□□ 0.32
IRF9-204ENST00000559229 EPHA7Q15375 998 aa17.06■□□□□ 0.32
IRF9-204ENST00000559229 IER5LQ5T953 404 aa17.06■□□□□ 0.32
IRF9-204ENST00000559229 OTUD6AQ7L8S5 288 aa17.06■□□□□ 0.32
IRF9-204ENST00000559229 SRGAP1Q7Z6B7 1085 aa17.06■□□□□ 0.32
IRF9-204ENST00000559229 MRPL10Q7Z7H8 261 aaKnown RBP17.06■□□□□ 0.32
IRF9-204ENST00000559229 TMEM87AQ8NBN3 555 aa17.06■□□□□ 0.32
IRF9-204ENST00000559229 PSPC1Q8WXF1 523 aaKnown RBP17.06■□□□□ 0.32
IRF9-204ENST00000559229 INPP5FQ9Y2H2 1132 aa17.06■□□□□ 0.32
IRF9-204ENST00000559229 PCDHB2Q9Y5E7 798 aa17.06■□□□□ 0.32
IRF9-204ENST00000559229 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.05■□□□□ 0.32
IRF9-204ENST00000559229 ASAP2O43150 1006 aa17.05■□□□□ 0.32
IRF9-204ENST00000559229 MARCH6O60337 910 aa17.05■□□□□ 0.32
IRF9-204ENST00000559229 PFKFB2O60825 505 aa17.05■□□□□ 0.32
IRF9-204ENST00000559229 SRGAP2CP0DJJ0 459 aa17.05■□□□□ 0.32
IRF9-204ENST00000559229 RNASELQ05823 741 aaKnown RBP17.05■□□□□ 0.32
IRF9-204ENST00000559229 AGMOQ6ZNB7 445 aa17.05■□□□□ 0.32
IRF9-204ENST00000559229 PIK3AP1Q6ZUJ8 805 aa17.05■□□□□ 0.32
IRF9-204ENST00000559229 OXER1Q8TDS5 423 aa17.05■□□□□ 0.32
IRF9-204ENST00000559229 TMEM143Q96AN5 459 aa17.05■□□□□ 0.32
IRF9-204ENST00000559229 POMKQ9H5K3 350 aa17.05■□□□□ 0.32
IRF9-204ENST00000559229 DZANK1Q9NVP4 752 aa17.05■□□□□ 0.32
IRF9-204ENST00000559229 STK39Q9UEW8 545 aa17.05■□□□□ 0.32
IRF9-204ENST00000559229 CDH22Q9UJ99 828 aa17.05■□□□□ 0.32
IRF9-204ENST00000559229 TPCN1Q9ULQ1 816 aa17.05■□□□□ 0.32
IRF9-204ENST00000559229 GAS2O43903 313 aaKnown RBP17.04■□□□□ 0.32
IRF9-204ENST00000559229 SP100P23497 879 aaPredicted RBP17.04■□□□□ 0.32
IRF9-204ENST00000559229 HOXA11P31270 313 aaPredicted RBP17.04■□□□□ 0.32
IRF9-204ENST00000559229 YWHABP31946 246 aaKnown RBP17.04■□□□□ 0.32
IRF9-204ENST00000559229 MTHFRP42898 656 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 PTPN5P54829 565 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 LAMTOR4Q0VGL1 99 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 ZBTB33Q86T24 672 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 ZNF280BQ86YH2 543 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 SLFN12Q8IYM2 578 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 PRSS33Q8NF86 280 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 URGCPQ8TCY9 931 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 BCL7CQ8WUZ0 217 aaPredicted RBP17.04■□□□□ 0.32
IRF9-204ENST00000559229 TCP11Q8WWU5 503 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 AUTS2Q8WXX7 1259 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 RIPOR3Q96MK2 946 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 LXNQ9BS40 222 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 ZSWIM4Q9H7M6 989 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 MINDY3Q9H8M7 445 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 TSHZ2Q9NRE2 1034 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 GJB4Q9NTQ9 266 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 RGL1Q9NZL6 768 aa17.04■□□□□ 0.32
IRF9-204ENST00000559229 KANSL3Q9P2N6 904 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms