RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 MUTP22033 750 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 HNRNPH1P31943 449 aaKnown RBP17.94■□□□□ 0.46
SPG11-215ENST00000559193 CEP55Q53EZ4 464 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 ODF2Q5BJF6 829 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 RDH13Q8NBN7 331 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 AGPAT1Q99943 283 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 ERP44Q9BS26 406 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 EPB41L4BQ9H329 900 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 TMOD4Q9NZQ9 345 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 BCS1LQ9Y276 419 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 HIP1RO75146 1068 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 PAEPP09466 180 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 GUCY2CP25092 1073 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 DLG4P78352 724 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 IFT88Q13099 833 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 QPCTQ16769 361 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 AADACL2Q6P093 401 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 GLG1Q92896 1179 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 CSRNP1Q96S65 589 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 NAP1L3Q99457 506 aaPredicted RBP17.94■□□□□ 0.46
SPG11-215ENST00000559193 LXNQ9BS40 222 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 DAAM1Q9Y4D1 1078 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 SPATA31A6Q5VVP1 1343 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 GOLGA6L10A0A0M3HER8 536 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 ENTPD3O75355 529 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 PDE6BP35913 854 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 SPDYCQ5MJ68 293 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 B3GNT9Q6UX72 402 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 ACER1Q8TDN7 264 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 TLCD1Q96CP7 247 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 ZNF577Q9BSK1 485 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 RFX1P22670 979 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 HADHBP55084 474 aaKnown RBP17.93■□□□□ 0.46
SPG11-215ENST00000559193 PPP2R5EQ16537 467 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 RNF187Q5TA31 235 aaPredicted RBP17.93■□□□□ 0.46
SPG11-215ENST00000559193 JAMLQ86YT9 394 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 ARHGEF19Q8IW93 802 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 SYCP3Q8IZU3 236 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 C3orf20Q8ND61 904 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 RAPGEF5Q92565 580 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 WDR11Q9BZH6 1224 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 DDX20Q9UHI6 824 aaKnown RBP17.93■□□□□ 0.46
SPG11-215ENST00000559193 SYNPO2Q9UMS6 1093 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 ALG6Q9Y672 507 aa17.93■□□□□ 0.46
SPG11-215ENST00000559193 EMSYQ7Z589 1322 aa17.92■□□□□ 0.46
SPG11-215ENST00000559193 FAM187AA6NFU0 413 aa17.92■□□□□ 0.46
SPG11-215ENST00000559193 TISP43B9A030 160 aa17.92■□□□□ 0.46
SPG11-215ENST00000559193 VIL1P09327 827 aaKnown RBP17.92■□□□□ 0.46
SPG11-215ENST00000559193 RHOT2Q8IXI1 618 aa17.92■□□□□ 0.46
SPG11-215ENST00000559193 PSMD1Q99460 953 aa17.92■□□□□ 0.46
SPG11-215ENST00000559193 ARHGEF35A5YM69 484 aa17.92■□□□□ 0.46
SPG11-215ENST00000559193 BACH1O14867 736 aa17.92■□□□□ 0.46
SPG11-215ENST00000559193 MARCKSL1P49006 195 aa17.92■□□□□ 0.46
SPG11-215ENST00000559193 IFFO1Q0D2I5 559 aa17.92■□□□□ 0.46
SPG11-215ENST00000559193 DHX34Q14147 1143 aaKnown RBP17.92■□□□□ 0.46
SPG11-215ENST00000559193 C11orf63Q6NUN7 778 aa17.92■□□□□ 0.46
SPG11-215ENST00000559193 ZDHHC24Q6UX98 284 aa17.92■□□□□ 0.46
SPG11-215ENST00000559193 TEX2Q8IWB9 1127 aa17.92■□□□□ 0.46
SPG11-215ENST00000559193 KRT35Q92764 455 aa17.92■□□□□ 0.46
SPG11-215ENST00000559193 ZNF622Q969S3 477 aaKnown RBP eCLIP17.92■□□□□ 0.463e-6■■□□□ 14
SPG11-215ENST00000559193 UBE2TQ9NPD8 197 aaPredicted RBP17.92■□□□□ 0.46
SPG11-215ENST00000559193 AFF2P51816 1311 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 K7ENM7 598 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 TRIM37O94972 964 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 SHBGP04278 402 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 GTF2A1P52655 376 aaPredicted RBP17.91■□□□□ 0.46
SPG11-215ENST00000559193 EIF3BP55884 814 aaKnown RBP17.91■□□□□ 0.46
SPG11-215ENST00000559193 PPP3CAQ08209 521 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 NLGN1Q8N2Q7 840 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 C18orf8Q96DM3 657 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 TEKT3Q9BXF9 490 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 RANBP17Q9H2T7 1088 aaKnown RBP17.91■□□□□ 0.46
SPG11-215ENST00000559193 C5orf60A6NFR6 353 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 KIAA0391O15091 583 aaKnown RBP17.91■□□□□ 0.46
SPG11-215ENST00000559193 CAND2O75155 1236 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 FTLP02792 175 aaPredicted RBP17.91■□□□□ 0.46
SPG11-215ENST00000559193 BCRP11274 1271 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 PTGIRP43119 386 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 TRAF1Q13077 416 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 MYBPC2Q14324 1141 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 PRMT6Q96LA8 375 aaPredicted RBP17.91■□□□□ 0.46
SPG11-215ENST00000559193 PCIF1Q9H4Z3 704 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 VCPKMTQ9H867 229 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 CTTNBP2NLQ9P2B4 639 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 SNX24Q9Y343 169 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 COL2A1P02458 1487 aaPredicted RBP17.91■□□□□ 0.46
SPG11-215ENST00000559193 SYNGAP1Q96PV0 1343 aa17.91■□□□□ 0.46
SPG11-215ENST00000559193 H0YHG0 523 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 PHF2O75151 1096 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 NUDT17P0C025 328 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 KRT13P13646 458 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 SETQ01105 290 aaPredicted RBP17.9■□□□□ 0.46
SPG11-215ENST00000559193 ACTN3Q08043 901 aaPredicted RBP17.9■□□□□ 0.46
SPG11-215ENST00000559193 COL23A1Q86Y22 540 aaPredicted RBP17.9■□□□□ 0.46
SPG11-215ENST00000559193 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.9■□□□□ 0.46
SPG11-215ENST00000559193 ARHGEF10LQ9HCE6 1279 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.9■□□□□ 0.46
SPG11-215ENST00000559193 TMX2Q9Y320 296 aa17.9■□□□□ 0.46
SPG11-215ENST00000559193 DDX39AO00148 427 aaKnown RBP17.9■□□□□ 0.46
SPG11-215ENST00000559193 IPO5O00410 1097 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms