RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 ERLIN2O94905 339 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 LETM1O95202 739 aaPredicted RBP7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 KIF20AO95235 890 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 PARNO95453 639 aaKnown RBP7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 PRKCBP05771 671 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 GHRP10912 638 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 DARSP14868 501 aaKnown RBP7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 RAG1P15918 1043 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 EIF4BP23588 611 aaKnown RBP7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 CYP2C18P33260 490 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 CCL23P55773 120 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 PTENP60484 403 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 MBTD1Q05BQ5 628 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 NCBP1Q09161 790 aaKnown RBP7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 MGAT3Q09327 533 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 PAK2Q13177 524 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 STIM1Q13586 685 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 PCBP1Q15365 356 aaKnown RBP eCLIP7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 MAPK6Q16659 721 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 FAM26DQ5JW98 314 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 FBXO47Q5MNV8 452 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 NT5DC1Q5TFE4 455 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 ZNF658Q5TYW1 1059 aaPredicted RBP7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 CDCA2Q69YH5 1023 aaPredicted RBP7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 SASS6Q6UVJ0 657 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 CATSPER4Q7RTX7 472 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 TRIML1Q8N9V2 468 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 TMEM161BQ8NDZ6 487 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 SPATA20Q8TB22 786 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 HPS3Q969F9 1004 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 HVCN1Q96D96 273 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 BICD1Q96G01 975 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 NFKBIZQ9BYH8 718 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 CDHR5Q9HBB8 845 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 IFT122Q9HBG6 1241 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 PRMT7Q9NVM4 692 aaPredicted RBP7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 ARHGAP28Q9P2N2 729 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 MAN1B1Q9UKM7 699 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 EXOC7Q9UPT5 735 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 NR2E3Q9Y5X4 410 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 KAT6AQ92794 2004 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 UBE4BO95155 1302 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 UMODL1Q5DID0 1318 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 ADGRA3Q8IWK6 1321 aa7.26□□□□□ -1.25
CHRNA3-204ENST00000559002 TRIM43BA6NCK2 446 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 HNRNPDLO14979 420 aaKnown RBP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 GPR182O15218 404 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 EIF3DO15371 548 aaKnown RBP eCLIP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 CSDE1O75534 798 aaKnown RBP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 CAPN15O75808 1086 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 PRPF6O94906 941 aaKnown RBP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 TIMP1P01033 207 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 CHRNA1P02708 482 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 IQCF3P0C7M6 154 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 MYBP10242 640 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 FGFR4P22455 802 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 CD52P31358 61 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 RFC2P35250 354 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 PPP1R2P41236 205 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 SARSP49591 514 aaKnown RBP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 GTF2BQ00403 316 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 EHHADHQ08426 723 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 STK4Q13043 487 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 PRPF4BQ13523 1007 aaKnown RBP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 MORC3Q14149 939 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 LPIN1Q14693 890 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 ZC2HC1CQ53FD0 456 aaPredicted RBP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 ISM2Q6H9L7 571 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 TRAF7Q6Q0C0 670 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 RBM43Q6ZSC3 357 aaKnown RBP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 TSHZ1Q6ZSZ6 1077 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 ZNF720Q7Z2F6 126 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 IFNLR1Q8IU57 520 aaPredicted RBP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 MAP4K3Q8IVH8 894 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 SMYD4Q8IYR2 804 aaPredicted RBP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 MYOCDQ8IZQ8 938 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 SYCP3Q8IZU3 236 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 TMEM199Q8N511 208 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 USP38Q8NB14 1042 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 KIAA0895Q8NCT3 520 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 TRIM43Q96BQ3 446 aaPredicted RBP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 SCLYQ96I15 445 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 PRIMPOLQ96LW4 560 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 ACCSQ96QU6 501 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 FIZ1Q96SL8 496 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 NTPCRQ9BSD7 190 aaKnown RBP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 MRPL4Q9BYD3 311 aaKnown RBP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 WNT8AQ9H1J5 351 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 ST6GALNAC4Q9H4F1 302 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 TMEM134Q9H6X4 195 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 TMEM206Q9H813 350 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 MINDY3Q9H8M7 445 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 DACH1Q9UI36 760 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 TBX20Q9UMR3 447 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 PIN4Q9Y237 131 aaKnown RBP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 GDAQ9Y2T3 454 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 NOC2LQ9Y3T9 749 aaKnown RBP7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 SQORQ9Y6N5 450 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 CNTNAP2Q9UHC6 1331 aa7.25□□□□□ -1.25
CHRNA3-204ENST00000559002 CEP290O15078 2479 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms