RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 SPTBN5Q9NRC6 3674 aaKnown RBP23.89■■□□□ 1.41
CRNDE-205ENST00000558952 REV3LO60673 3130 aa23.88■■□□□ 1.41
CRNDE-205ENST00000558952 A0A087WWV3 80 aa23.88■■□□□ 1.41
CRNDE-205ENST00000558952 RPA1P27694 616 aa23.88■■□□□ 1.41
CRNDE-205ENST00000558952 PPM1AP35813 382 aa23.88■■□□□ 1.41
CRNDE-205ENST00000558952 HYAL1Q12794 435 aa23.88■■□□□ 1.41
CRNDE-205ENST00000558952 CAMK1Q14012 370 aa23.88■■□□□ 1.41
CRNDE-205ENST00000558952 PCBP1Q15365 356 aaKnown RBP eCLIP23.88■■□□□ 1.41
CRNDE-205ENST00000558952 PUS10Q3MIT2 529 aaKnown RBP23.88■■□□□ 1.41
CRNDE-205ENST00000558952 KCNT2Q6UVM3 1135 aa23.88■■□□□ 1.41
CRNDE-205ENST00000558952 LRRC55Q6ZSA7 311 aa23.88■■□□□ 1.41
CRNDE-205ENST00000558952 NECAB3Q96P71 396 aaPredicted RBP23.88■■□□□ 1.41
CRNDE-205ENST00000558952 IGFLR1Q9H665 355 aa23.88■■□□□ 1.41
CRNDE-205ENST00000558952 MINDY3Q9H8M7 445 aa23.88■■□□□ 1.41
CRNDE-205ENST00000558952 DBR1Q9UK59 544 aaKnown RBP23.88■■□□□ 1.41
CRNDE-205ENST00000558952 SMC3Q9UQE7 1217 aa23.88■■□□□ 1.41
CRNDE-205ENST00000558952 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.88■■□□□ 1.41
CRNDE-205ENST00000558952 H3BQ06 376 aaPredicted RBP23.87■■□□□ 1.41
CRNDE-205ENST00000558952 FXR2P51116 673 aaKnown RBP eCLIP23.87■■□□□ 1.41
CRNDE-205ENST00000558952 PTENP60484 403 aa23.87■■□□□ 1.41
CRNDE-205ENST00000558952 GLB1LQ6UWU2 654 aa23.87■■□□□ 1.41
CRNDE-205ENST00000558952 MCPH1Q8NEM0 835 aa23.87■■□□□ 1.41
CRNDE-205ENST00000558952 POLR3FQ9H1D9 316 aaPredicted RBP23.87■■□□□ 1.41
CRNDE-205ENST00000558952 TLR9Q9NR96 1032 aa23.87■■□□□ 1.41
CRNDE-205ENST00000558952 LRWD1Q9UFC0 647 aa23.87■■□□□ 1.41
CRNDE-205ENST00000558952 PUF60Q9UHX1 559 aaKnown RBP23.87■■□□□ 1.41
CRNDE-205ENST00000558952 STK24Q9Y6E0 443 aa23.87■■□□□ 1.41
CRNDE-205ENST00000558952 XIRP2A4UGR9 3374 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 INO80B-WBP1J3KQ70 363 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 LAD1O00515 517 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 ZNF623O75123 536 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 MUTP22033 750 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 IRS1P35568 1242 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 ARL2P36404 184 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 CCT6AP40227 531 aaKnown RBP23.86■■□□□ 1.41
CRNDE-205ENST00000558952 KRT17Q04695 432 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 POU5F1BQ06416 359 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 PTGDRQ13258 359 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 CAPSQ13938 189 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 COL19A1Q14993 1142 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 LONRF3Q496Y0 759 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 POTEGQ6S5H5 508 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.86■■□□□ 1.41
CRNDE-205ENST00000558952 ASAP3Q8TDY4 903 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 LPPQ93052 612 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 FAM50BQ9Y247 325 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 LZTS1Q9Y250 596 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 PCDHB6Q9Y5E3 794 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 PCDHB2Q9Y5E7 798 aa23.86■■□□□ 1.41
CRNDE-205ENST00000558952 ARHGEF35A5YM69 484 aa23.85■■□□□ 1.41
CRNDE-205ENST00000558952 AXLP30530 894 aa23.85■■□□□ 1.41
CRNDE-205ENST00000558952 TOB1P50616 345 aaPredicted RBP23.85■■□□□ 1.41
CRNDE-205ENST00000558952 PLCB3Q01970 1234 aa23.85■■□□□ 1.41
CRNDE-205ENST00000558952 RILPL1Q5EBL4 403 aa23.85■■□□□ 1.41
CRNDE-205ENST00000558952 PTCRAQ6ISU1 281 aaPredicted RBP23.85■■□□□ 1.41
CRNDE-205ENST00000558952 PDE12Q6L8Q7 609 aaKnown RBP23.85■■□□□ 1.41
CRNDE-205ENST00000558952 MAEAQ7L5Y9 396 aa23.85■■□□□ 1.41
CRNDE-205ENST00000558952 C4orf32Q8N8J7 132 aa23.85■■□□□ 1.41
CRNDE-205ENST00000558952 MRPS27Q92552 414 aaKnown RBP23.85■■□□□ 1.41
CRNDE-205ENST00000558952 SPG21Q9NZD8 308 aa23.85■■□□□ 1.41
CRNDE-205ENST00000558952 INPP5FQ9Y2H2 1132 aa23.85■■□□□ 1.41
CRNDE-205ENST00000558952 CARNS1A5YM72 827 aa23.84■■□□□ 1.41
CRNDE-205ENST00000558952 GLRA2P23416 452 aa23.84■■□□□ 1.41
CRNDE-205ENST00000558952 ALDH7A1P49419 539 aaKnown RBP23.84■■□□□ 1.41
CRNDE-205ENST00000558952 RNASELQ05823 741 aaKnown RBP23.84■■□□□ 1.41
CRNDE-205ENST00000558952 PDIA5Q14554 519 aa23.84■■□□□ 1.41
CRNDE-205ENST00000558952 NOMO2Q5JPE7 1267 aa23.84■■□□□ 1.41
CRNDE-205ENST00000558952 IFNLR1Q8IU57 520 aaPredicted RBP23.84■■□□□ 1.41
CRNDE-205ENST00000558952 TCF20Q9UGU0 1960 aaKnown RBP23.83■■□□□ 1.41
CRNDE-205ENST00000558952 PLXNA4Q9HCM2 1894 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 CUL9Q8IWT3 2517 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 ATG2AQ2TAZ0 1938 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 LRRIQ4A6NIV6 560 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 TSPAN1O60635 241 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 HOXA11P31270 313 aaPredicted RBP23.83■■□□□ 1.41
CRNDE-205ENST00000558952 GTF2F1P35269 517 aaKnown RBP eCLIP23.83■■□□□ 1.41
CRNDE-205ENST00000558952 PBX3P40426 434 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 NRIP1P48552 1158 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 CTC1Q2NKJ3 1217 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 NOTUMQ6P988 496 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 PADI6Q6TGC4 694 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 ADGRD2Q7Z7M1 963 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 RBM23Q86U06 439 aaKnown RBP23.83■■□□□ 1.41
CRNDE-205ENST00000558952 CNNM3Q8NE01 707 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 URGCPQ8TCY9 931 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 CCDC51Q96ER9 411 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 NFKBIZQ9BYH8 718 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 TLE6Q9H808 572 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 ENTPD7Q9NQZ7 604 aa23.83■■□□□ 1.41
CRNDE-205ENST00000558952 CNTNAP2Q9UHC6 1331 aa23.83■■□□□ 1.4
CRNDE-205ENST00000558952 FSD2A1L4K1 749 aa23.82■■□□□ 1.4
CRNDE-205ENST00000558952 ZC3H11AO75152 810 aaKnown RBP eCLIP23.82■■□□□ 1.4
CRNDE-205ENST00000558952 PRPHP41219 470 aa23.82■■□□□ 1.4
CRNDE-205ENST00000558952 NDUFV1P49821 464 aa23.82■■□□□ 1.4
CRNDE-205ENST00000558952 ERVFC1P60507 584 aa23.82■■□□□ 1.4
CRNDE-205ENST00000558952 MBTD1Q05BQ5 628 aa23.82■■□□□ 1.4
CRNDE-205ENST00000558952 DTHD1Q6ZMT9 781 aa23.82■■□□□ 1.4
CRNDE-205ENST00000558952 IGSF22Q8N9C0 903 aa23.82■■□□□ 1.4
CRNDE-205ENST00000558952 SNX29Q8TEQ0 813 aa23.82■■□□□ 1.4
CRNDE-205ENST00000558952 RSAD1Q9HA92 442 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms