RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 TMX3Q96JJ7 454 aa17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 JAKMIP1Q96N16 626 aaKnown RBP17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 TRAIPQ9BWF2 469 aa17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 SFXN1Q9H9B4 322 aa17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 FBXL21Q9UKT6 434 aa17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 PLXNA3P51805 1871 aa17.99■□□□□ 0.47
CDC42BPB-203ENST00000558867 HSP90AA1P07900 732 aaKnown RBP17.98■□□□□ 0.47
CDC42BPB-203ENST00000558867 CIITAP33076 1130 aa17.98■□□□□ 0.47
CDC42BPB-203ENST00000558867 PHKA2P46019 1235 aa17.98■□□□□ 0.47
CDC42BPB-203ENST00000558867 RAB27AP51159 221 aa17.98■□□□□ 0.47
CDC42BPB-203ENST00000558867 EXOSC10Q01780 885 aaKnown RBP17.98■□□□□ 0.47
CDC42BPB-203ENST00000558867 NONOQ15233 471 aaKnown RBP eCLIP17.98■□□□□ 0.47
CDC42BPB-203ENST00000558867 NOMO2Q5JPE7 1267 aa17.98■□□□□ 0.47
CDC42BPB-203ENST00000558867 FRMD5Q7Z6J6 570 aa17.98■□□□□ 0.47
CDC42BPB-203ENST00000558867 URGCPQ8TCY9 931 aa17.98■□□□□ 0.47
CDC42BPB-203ENST00000558867 ZNF668Q96K58 619 aaPredicted RBP17.98■□□□□ 0.47
CDC42BPB-203ENST00000558867 RIT2Q99578 217 aa17.98■□□□□ 0.47
CDC42BPB-203ENST00000558867 DPP7Q9UHL4 492 aa17.98■□□□□ 0.47
CDC42BPB-203ENST00000558867 BRPF3Q9ULD4 1205 aa17.98■□□□□ 0.47
CDC42BPB-203ENST00000558867 GAS7O60861 476 aa17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 EPCAMP16422 314 aa17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 RFX1P22670 979 aa17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 KLRC2P26717 231 aa17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 ID4P47928 161 aa17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 COL9A3Q14050 684 aaPredicted RBP17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 ANKRD1Q15327 319 aa17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 BLOC1S2Q6QNY1 142 aa17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 TMC5Q6UXY8 1006 aa17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 GPR149Q86SP6 731 aa17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 CCDC148Q8NFR7 591 aa17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 RDM1Q8NG50 284 aa17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 ZSCAN31Q96LW9 406 aaPredicted RBP17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 JPH2Q9BR39 696 aaPredicted RBP17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 TEKT3Q9BXF9 490 aa17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 LIMCH1Q9UPQ0 1083 aa17.97■□□□□ 0.47
CDC42BPB-203ENST00000558867 AOC1P19801 751 aa17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 FGFR4P22455 802 aa17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 RPS6KB1P23443 525 aa17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 ZNF410Q86VK4 478 aa17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 ADSSL1Q8N142 457 aa17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 SLC22A17Q8WUG5 538 aa17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 FAM193BQ96PV7 902 aaPredicted RBP17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 SEMA4AQ9H3S1 761 aa17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 SH2B1Q9NRF2 756 aaPredicted RBP17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 PDRG1Q9NUG6 133 aa17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 IGSF9Q9P2J2 1179 aa17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 SEPT9Q9UHD8 586 aaPredicted RBP17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 PIN4Q9Y237 131 aaKnown RBP17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 SSX2IPQ9Y2D8 614 aa17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 INPP5FQ9Y2H2 1132 aa17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 MYO15AQ9UKN7 3530 aa17.96■□□□□ 0.47
CDC42BPB-203ENST00000558867 STK25O00506 426 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 CHMP2AO43633 222 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 ZNF862O60290 1169 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 GALTP07902 379 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 CDC27P30260 824 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 ADD1P35611 737 aaKnown RBP17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 USP11P51784 963 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 AK2P54819 239 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 XKR3Q5GH77 459 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 LRCH2Q5VUJ6 765 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 C15orf39Q6ZRI6 1047 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 CATSPER4Q7RTX7 472 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 CCDC105Q8IYK2 499 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 FBXL16Q8N461 479 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 AUTS2Q8WXX7 1259 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 STAMQ92783 540 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 TCEANC2Q96MN5 208 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 SMOC2Q9H3U7 446 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 NRDE2Q9H7Z3 1164 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 MRPL17Q9NRX2 175 aaKnown RBP17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 FAM105AQ9NUU6 356 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 TBC1D13Q9NVG8 400 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 KANSL3Q9P2N6 904 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 DUSP12Q9UNI6 340 aa17.95■□□□□ 0.46
CDC42BPB-203ENST00000558867 A0A087WZ62 844 aa17.94■□□□□ 0.46
CDC42BPB-203ENST00000558867 PRPF3O43395 683 aaKnown RBP17.94■□□□□ 0.46
CDC42BPB-203ENST00000558867 ZNF623O75123 536 aa17.94■□□□□ 0.46
CDC42BPB-203ENST00000558867 ALDH2P05091 517 aa17.94■□□□□ 0.46
CDC42BPB-203ENST00000558867 MTERF2Q49AM1 385 aa17.94■□□□□ 0.46
CDC42BPB-203ENST00000558867 CYP26C1Q6V0L0 522 aa17.94■□□□□ 0.46
CDC42BPB-203ENST00000558867 MIER3Q7Z3K6 550 aa17.94■□□□□ 0.46
CDC42BPB-203ENST00000558867 EXOC8Q8IYI6 725 aa17.94■□□□□ 0.46
CDC42BPB-203ENST00000558867 KCNG4Q8TDN1 519 aa17.94■□□□□ 0.46
CDC42BPB-203ENST00000558867 FDXACB1Q9BRP7 624 aaPredicted RBP17.94■□□□□ 0.46
CDC42BPB-203ENST00000558867 NIFKQ9BYG3 293 aaKnown RBP17.94■□□□□ 0.46
CDC42BPB-203ENST00000558867 GBP3Q9H0R5 595 aa17.94■□□□□ 0.46
CDC42BPB-203ENST00000558867 FAM217BQ9NTX9 383 aaPredicted RBP17.94■□□□□ 0.46
CDC42BPB-203ENST00000558867 SUCLA2Q9P2R7 463 aaPredicted RBP17.94■□□□□ 0.46
CDC42BPB-203ENST00000558867 MSH4O15457 936 aa17.93■□□□□ 0.46
CDC42BPB-203ENST00000558867 CSDE1O75534 798 aaKnown RBP17.93■□□□□ 0.46
CDC42BPB-203ENST00000558867 ANGPT1Q15389 498 aa17.93■□□□□ 0.46
CDC42BPB-203ENST00000558867 TARBP2Q15633 366 aaKnown RBP17.93■□□□□ 0.46
CDC42BPB-203ENST00000558867 PTPN14Q15678 1187 aa17.93■□□□□ 0.46
CDC42BPB-203ENST00000558867 LETM2Q2VYF4 491 aa17.93■□□□□ 0.46
CDC42BPB-203ENST00000558867 KANK3Q6NY19 840 aa17.93■□□□□ 0.46
CDC42BPB-203ENST00000558867 RHPN2Q8IUC4 686 aa17.93■□□□□ 0.46
CDC42BPB-203ENST00000558867 SIX5Q8N196 739 aa17.93■□□□□ 0.46
CDC42BPB-203ENST00000558867 DTWD2Q8NBA8 298 aa17.93■□□□□ 0.46
CDC42BPB-203ENST00000558867 SLC5A5Q92911 643 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms