RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 ABI1Q8IZP0 508 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 GJD3Q8N144 294 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 LRRC43Q8N309 656 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 KLHL23Q8NBE8 558 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 PRR7Q8TB68 274 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 ETNPPLQ8TBG4 499 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 POF1BQ8WVV4 589 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 WASF1Q92558 559 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 AIFM3Q96NN9 605 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 PHF20Q9BVI0 1012 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 TMEM117Q9H0C3 514 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 ADAMTS10Q9H324 1103 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 BRMS1Q9HCU9 246 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 PPP4R2Q9NY27 417 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 SLC37A4O43826 429 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 EDIL3O43854 480 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 PFKFB2O60825 505 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 GPR37L1O60883 481 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 TBX10O75333 385 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 FGFR1P11362 822 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 NDUFV1P49821 464 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 DNM2P50570 870 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 PSMC5P62195 406 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 CDC42EP1Q00587 391 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 PPP2R5CQ13362 524 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 NR6A1Q15406 480 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 TARBP2Q15633 366 aaKnown RBP9.04□□□□□ -0.96
TRAF3-205ENST00000558700 CTC1Q2NKJ3 1217 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 KMT5BQ4FZB7 885 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 PPP4R3AQ6IN85 833 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 B3GNT9Q6UX72 402 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 ZNF410Q86VK4 478 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 EFHBQ8N7U6 833 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 COLGALT1Q8NBJ5 622 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 SPPL3Q8TCT6 385 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 RSPH1Q8WYR4 309 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 GJA10Q969M2 543 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 FAM20AQ96MK3 541 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 MRPL9Q9BYD2 267 aaKnown RBP9.04□□□□□ -0.96
TRAF3-205ENST00000558700 NIFKQ9BYG3 293 aaKnown RBP9.04□□□□□ -0.96
TRAF3-205ENST00000558700 GCOM2Q9BZD3 368 aaPredicted RBP9.04□□□□□ -0.96
TRAF3-205ENST00000558700 TLR9Q9NR96 1032 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 DACT1Q9NYF0 836 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 CD207Q9UJ71 328 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 KCNJ14Q9UNX9 436 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 HCN4Q9Y3Q4 1203 aa9.04□□□□□ -0.96
TRAF3-205ENST00000558700 CARNS1A5YM72 827 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 TBX3O15119 743 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 MBTPS2O43462 519 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 RNF40O75150 1001 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 FGF18O76093 207 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 SRGAP2BP0DMP2 458 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 DNAJB1P25685 340 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 LTBRP36941 435 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 AK2P54819 239 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 FAM189BP81408 668 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 ZP2Q05996 745 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 CAMK1Q14012 370 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 CLUL1Q15846 466 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 PDE12Q6L8Q7 609 aaKnown RBP9.03□□□□□ -0.96
TRAF3-205ENST00000558700 PIK3AP1Q6ZUJ8 805 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 ECHDC2Q86YB7 292 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 ADHFE1Q8IWW8 467 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 EXOC8Q8IYI6 725 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 SLC7A3Q8WY07 619 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 CDCA3Q99618 268 aaPredicted RBP9.03□□□□□ -0.96
TRAF3-205ENST00000558700 INO80BQ9C086 356 aaPredicted RBP9.03□□□□□ -0.96
TRAF3-205ENST00000558700 IGFLR1Q9H665 355 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 EPHX3Q9H6B9 360 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 VRTNQ9H8Y1 702 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 KCNMB3Q9NPA1 279 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 ORC3Q9UBD5 711 aaPredicted RBP9.03□□□□□ -0.96
TRAF3-205ENST00000558700 VAV3Q9UKW4 847 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 TPCN1Q9ULQ1 816 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 LZTS1Q9Y250 596 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 PPME1Q9Y570 386 aa9.03□□□□□ -0.96
TRAF3-205ENST00000558700 IGKV6-21A0A0C4DH24 114 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 TMEM150BA6NC51 233 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 PI4K2BG5E9Z4 385 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 LINC01565O15544 149 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 GAS2O43903 313 aaKnown RBP9.02□□□□□ -0.97
TRAF3-205ENST00000558700 MARCH6O60337 910 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 CCNT1O60563 726 aaKnown RBP9.02□□□□□ -0.97
TRAF3-205ENST00000558700 MAFO75444 373 aaPredicted RBP9.02□□□□□ -0.97
TRAF3-205ENST00000558700 EOMESO95936 686 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 SKIP12755 728 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 ALADP13716 330 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 GTF2F1P35269 517 aaKnown RBP eCLIP9.02□□□□□ -0.97
TRAF3-205ENST00000558700 IRS1P35568 1242 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 KRT2P35908 639 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 QARSP47897 775 aaKnown RBP9.02□□□□□ -0.97
TRAF3-205ENST00000558700 NRIP1P48552 1158 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 RBM25P49756 843 aaKnown RBP9.02□□□□□ -0.97
TRAF3-205ENST00000558700 RAB27AP51159 221 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 POLGP54098 1239 aaPredicted RBP9.02□□□□□ -0.97
TRAF3-205ENST00000558700 ADAM15Q13444 863 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 SMAD2Q15796 467 aaKnown RBP9.02□□□□□ -0.97
TRAF3-205ENST00000558700 FAM102BQ5T8I3 360 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 PLA2G4FQ68DD2 849 aa9.02□□□□□ -0.97
TRAF3-205ENST00000558700 ADGRD2Q7Z7M1 963 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms