RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 LPPQ93052 612 aa13.04□□□□□ -0.32
SHF-204ENST00000558685 NFKBIZQ9BYH8 718 aa13.04□□□□□ -0.32
SHF-204ENST00000558685 RAB34Q9BZG1 259 aa13.04□□□□□ -0.32
SHF-204ENST00000558685 CWH43Q9H720 699 aa13.04□□□□□ -0.32
SHF-204ENST00000558685 TYW1Q9NV66 732 aaKnown RBP13.04□□□□□ -0.32
SHF-204ENST00000558685 DACT1Q9NYF0 836 aa13.04□□□□□ -0.32
SHF-204ENST00000558685 LMCD1Q9NZU5 365 aa13.04□□□□□ -0.32
SHF-204ENST00000558685 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
SHF-204ENST00000558685 TTLL13PA6NNM8 815 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 STX6O43752 255 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 GTPBP6O43824 516 aaPredicted RBP13.03□□□□□ -0.32
SHF-204ENST00000558685 ZNF623O75123 536 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 EYA4O95677 639 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 EOMESO95936 686 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 RB1P06400 928 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 DNAJB1P25685 340 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 LONRF3Q496Y0 759 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 TWF2Q6IBS0 349 aaKnown RBP13.03□□□□□ -0.32
SHF-204ENST00000558685 DAW1Q8N136 415 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 RNF169Q8NCN4 708 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 MCPH1Q8NEM0 835 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 MRPL38Q96DV4 380 aaKnown RBP13.03□□□□□ -0.32
SHF-204ENST00000558685 CCDC43Q96MW1 224 aaKnown RBP13.03□□□□□ -0.32
SHF-204ENST00000558685 PLIN2Q99541 437 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 RUSC1Q9BVN2 902 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 TMEM117Q9H0C3 514 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 ALG13Q9NP73 1137 aaKnown RBP13.03□□□□□ -0.32
SHF-204ENST00000558685 FAM105AQ9NUU6 356 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 PLAGL2Q9UPG8 496 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 STK24Q9Y6E0 443 aa13.03□□□□□ -0.32
SHF-204ENST00000558685 RALGAPA2Q2PPJ7 1873 aa13.02□□□□□ -0.32
SHF-204ENST00000558685 INO80B-WBP1J3KQ70 363 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 B4GALT5O43286 388 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 EDN1P05305 212 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 ITGB1P05556 798 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 ARF4P18085 180 aaPredicted RBP13.02□□□□□ -0.33
SHF-204ENST00000558685 AFF1P51825 1210 aaKnown RBP13.02□□□□□ -0.33
SHF-204ENST00000558685 MAPK7Q13164 816 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 TFDP1Q14186 410 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 TMEM119Q4V9L6 283 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 CDCA2Q69YH5 1023 aaPredicted RBP13.02□□□□□ -0.33
SHF-204ENST00000558685 C1orf186Q6ZWK4 172 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 MRPL10Q7Z7H8 261 aaKnown RBP13.02□□□□□ -0.33
SHF-204ENST00000558685 HSCBQ8IWL3 235 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 KLHL23Q8NBE8 558 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 SMG8Q8ND04 991 aaKnown RBP13.02□□□□□ -0.33
SHF-204ENST00000558685 SPPL3Q8TCT6 385 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 HELQQ8TDG4 1101 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 CPB2Q96IY4 423 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 PLVAPQ9BX97 442 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 EIF2AQ9BY44 585 aaKnown RBP13.02□□□□□ -0.33
SHF-204ENST00000558685 DNM3Q9UQ16 869 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 RWDD3Q9Y3V2 267 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 PCDHB2Q9Y5E7 798 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 KIAA1671Q9BY89 1806 aa13.02□□□□□ -0.33
SHF-204ENST00000558685 LRRIQ4A6NIV6 560 aa13.01□□□□□ -0.33
SHF-204ENST00000558685 BMP15O95972 392 aa13.01□□□□□ -0.33
SHF-204ENST00000558685 ZRSR1Q15695 479 aaKnown RBP13.01□□□□□ -0.33
SHF-204ENST00000558685 RINT1Q6NUQ1 792 aa13.01□□□□□ -0.33
SHF-204ENST00000558685 AGMOQ6ZNB7 445 aa13.01□□□□□ -0.33
SHF-204ENST00000558685 USP49Q70CQ1 688 aa13.01□□□□□ -0.33
SHF-204ENST00000558685 P2RX5Q93086 422 aa13.01□□□□□ -0.33
SHF-204ENST00000558685 USP28Q96RU2 1077 aa13.01□□□□□ -0.33
SHF-204ENST00000558685 C11orf84Q9BUA3 381 aaPredicted RBP13.01□□□□□ -0.33
SHF-204ENST00000558685 KIFC3Q9BVG8 833 aa13.01□□□□□ -0.33
SHF-204ENST00000558685 CCDC113Q9H0I3 377 aa13.01□□□□□ -0.33
SHF-204ENST00000558685 RNF39Q9H2S5 420 aa13.01□□□□□ -0.33
SHF-204ENST00000558685 FZD8Q9H461 694 aa13.01□□□□□ -0.33
SHF-204ENST00000558685 RNF216Q9NWF9 866 aaPredicted RBP13.01□□□□□ -0.33
SHF-204ENST00000558685 FBXO2Q9UK22 296 aaPredicted RBP13.01□□□□□ -0.33
SHF-204ENST00000558685 USP20Q9Y2K6 914 aa13.01□□□□□ -0.33
SHF-204ENST00000558685 SPTBN5Q9NRC6 3674 aaKnown RBP13.01□□□□□ -0.33
SHF-204ENST00000558685 HOXA2O43364 376 aa13□□□□□ -0.33
SHF-204ENST00000558685 B4GALT3O60512 393 aa13□□□□□ -0.33
SHF-204ENST00000558685 OFD1O75665 1012 aa13□□□□□ -0.33
SHF-204ENST00000558685 MARCKSP29966 332 aaPredicted RBP13□□□□□ -0.33
SHF-204ENST00000558685 PBX3P40426 434 aa13□□□□□ -0.33
SHF-204ENST00000558685 RAB27AP51159 221 aa13□□□□□ -0.33
SHF-204ENST00000558685 SLC12A3P55017 1021 aa13□□□□□ -0.33
SHF-204ENST00000558685 TFF2Q03403 129 aa13□□□□□ -0.33
SHF-204ENST00000558685 CEBPZQ03701 1054 aaKnown RBP13□□□□□ -0.33
SHF-204ENST00000558685 PKP1Q13835 747 aa13□□□□□ -0.33
SHF-204ENST00000558685 PCBP1Q15365 356 aaKnown RBP eCLIP13□□□□□ -0.33
SHF-204ENST00000558685 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
SHF-204ENST00000558685 CABP7Q86V35 215 aa13□□□□□ -0.33
SHF-204ENST00000558685 CDR2LQ86X02 465 aaPredicted RBP13□□□□□ -0.33
SHF-204ENST00000558685 COLGALT1Q8NBJ5 622 aa13□□□□□ -0.33
SHF-204ENST00000558685 SPRYD3Q8NCJ5 442 aa13□□□□□ -0.33
SHF-204ENST00000558685 AK8Q96MA6 479 aa13□□□□□ -0.33
SHF-204ENST00000558685 CSRNP2Q9H175 543 aa13□□□□□ -0.33
SHF-204ENST00000558685 BLOC1S4Q9NUP1 217 aa13□□□□□ -0.33
SHF-204ENST00000558685 ATG2AQ2TAZ0 1938 aa13□□□□□ -0.33
SHF-204ENST00000558685 A0A1B0GUA9 196 aa12.99□□□□□ -0.33
SHF-204ENST00000558685 HIP1RO75146 1068 aa12.99□□□□□ -0.33
SHF-204ENST00000558685 ERLIN2O94905 339 aa12.99□□□□□ -0.33
SHF-204ENST00000558685 SKIP12755 728 aa12.99□□□□□ -0.33
SHF-204ENST00000558685 NCLP19338 710 aaKnown RBP12.99□□□□□ -0.33
SHF-204ENST00000558685 AXLP30530 894 aa12.99□□□□□ -0.33
SHF-204ENST00000558685 IRS1P35568 1242 aa12.99□□□□□ -0.33
SHF-204ENST00000558685 LONP1P36776 959 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms