RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 CLDND1Q9NY35 253 aa17.26■□□□□ 0.35
LINC01220-201ENST00000558575 CIZ1Q9ULV3 898 aaPredicted RBP17.26■□□□□ 0.35
LINC01220-201ENST00000558575 PCDHA7Q9UN72 937 aa17.26■□□□□ 0.35
LINC01220-201ENST00000558575 PPME1Q9Y570 386 aa17.26■□□□□ 0.35
LINC01220-201ENST00000558575 CDY2AQ9Y6F7 541 aa17.26■□□□□ 0.35
LINC01220-201ENST00000558575 TMEM221A6NGB7 291 aa17.25■□□□□ 0.35
LINC01220-201ENST00000558575 M0R296 226 aa17.25■□□□□ 0.35
LINC01220-201ENST00000558575 GPR32O75388 356 aa17.25■□□□□ 0.35
LINC01220-201ENST00000558575 RFC5P40937 340 aa17.25■□□□□ 0.35
LINC01220-201ENST00000558575 DLX2Q07687 328 aaPredicted RBP17.25■□□□□ 0.35
LINC01220-201ENST00000558575 PTPROQ16827 1216 aa17.25■□□□□ 0.35
LINC01220-201ENST00000558575 SHC4Q6S5L8 630 aa17.25■□□□□ 0.35
LINC01220-201ENST00000558575 RSPH3Q86UC2 560 aa17.25■□□□□ 0.35
LINC01220-201ENST00000558575 TMEM143Q96AN5 459 aa17.25■□□□□ 0.35
LINC01220-201ENST00000558575 PBXIP1Q96AQ6 731 aa17.25■□□□□ 0.35
LINC01220-201ENST00000558575 CELF4Q9BZC1 486 aaKnown RBP17.25■□□□□ 0.35
LINC01220-201ENST00000558575 BHMT2Q9H2M3 363 aa17.25■□□□□ 0.35
LINC01220-201ENST00000558575 BLOC1S4Q9NUP1 217 aa17.25■□□□□ 0.35
LINC01220-201ENST00000558575 DNM3Q9UQ16 869 aa17.25■□□□□ 0.35
LINC01220-201ENST00000558575 EVPLQ92817 2033 aa17.25■□□□□ 0.35
LINC01220-201ENST00000558575 ZNF292O60281 2723 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 A0A087X0B3 334 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 MBTPS2O43462 519 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 SLC26A4O43511 780 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 EYA4O95677 639 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 POLGP54098 1239 aaPredicted RBP17.24■□□□□ 0.35
LINC01220-201ENST00000558575 HTRA4P83105 476 aaPredicted RBP17.24■□□□□ 0.35
LINC01220-201ENST00000558575 LPIN1Q14693 890 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 EMC2Q15006 297 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 IER5Q5VY09 327 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 PADI6Q6TGC4 694 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 TRIM67Q6ZTA4 783 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 KSR1Q8IVT5 923 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 KCNG4Q8TDN1 519 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 TMEM40Q8WWA1 233 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 ZNF668Q96K58 619 aaPredicted RBP17.24■□□□□ 0.35
LINC01220-201ENST00000558575 PPP1R16BQ96T49 567 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 NSUN3Q9H649 340 aaKnown RBP17.24■□□□□ 0.35
LINC01220-201ENST00000558575 AGO3Q9H9G7 860 aaKnown RBP17.24■□□□□ 0.35
LINC01220-201ENST00000558575 POLD4Q9HCU8 107 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 SUCLA2Q9P2R7 463 aaPredicted RBP17.24■□□□□ 0.35
LINC01220-201ENST00000558575 INSL6Q9Y581 213 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 ATP6V1DQ9Y5K8 247 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 TRPV2Q9Y5S1 764 aa17.24■□□□□ 0.35
LINC01220-201ENST00000558575 KDM3AQ9Y4C1 1321 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 H3BNC9 293 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 CUTAO60888 179 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 DGAT1O75907 488 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 RPLP2P05387 115 aaKnown RBP17.23■□□□□ 0.35
LINC01220-201ENST00000558575 CYP11B2P19099 503 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 PLCG1P19174 1290 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 TMOD1P28289 359 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 ARL2P36404 184 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 NLRP11P59045 1033 aaKnown RBP17.23■□□□□ 0.35
LINC01220-201ENST00000558575 KRT85P78386 507 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 GPM6BQ13491 265 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 KIZQ2M2Z5 673 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 NAALADL2Q58DX5 795 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 FBXO47Q5MNV8 452 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 PRPF31Q8WWY3 499 aaKnown RBP17.23■□□□□ 0.35
LINC01220-201ENST00000558575 SLC7A3Q8WY07 619 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 IPO9Q96P70 1041 aaKnown RBP17.23■□□□□ 0.35
LINC01220-201ENST00000558575 PRRX2Q99811 253 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 PANK2Q9BZ23 570 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 GPRC5CQ9NQ84 441 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 AKT3Q9Y243 479 aa17.23■□□□□ 0.35
LINC01220-201ENST00000558575 DMDP11532 3685 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 EPG5Q9HCE0 2579 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 MYH15Q9Y2K3 1946 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 ARHGEF35A5YM69 484 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 USO1O60763 962 aaKnown RBP17.22■□□□□ 0.35
LINC01220-201ENST00000558575 PARNO95453 639 aaKnown RBP17.22■□□□□ 0.35
LINC01220-201ENST00000558575 GHRP10912 638 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 NCLP19338 710 aaKnown RBP17.22■□□□□ 0.35
LINC01220-201ENST00000558575 GPC3P51654 580 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 IKBKEQ14164 716 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 CTC1Q2NKJ3 1217 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 PLEKHG4Q58EX7 1191 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 C1orf186Q6ZWK4 172 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 MAEAQ7L5Y9 396 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 KCTD17Q8N5Z5 321 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 SYT2Q8N9I0 419 aaPredicted RBP17.22■□□□□ 0.35
LINC01220-201ENST00000558575 DBF4BQ8NFT6 615 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 CALML4Q96GE6 196 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 MAP7D2Q96T17 732 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 POP1Q99575 1024 aaKnown RBP17.22■□□□□ 0.35
LINC01220-201ENST00000558575 MTRQ99707 1265 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 JPH2Q9BR39 696 aaPredicted RBP17.22■□□□□ 0.35
LINC01220-201ENST00000558575 RUSC1Q9BVN2 902 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 NT5C3AQ9H0P0 336 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 GDPD2Q9HCC8 539 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 CHMP5Q9NZZ3 219 aa17.22■□□□□ 0.35
LINC01220-201ENST00000558575 KMT2BQ9UMN6 2715 aaPredicted RBP17.21■□□□□ 0.35
LINC01220-201ENST00000558575 EFCAB14O75071 495 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 PLA2G4BP0C869 781 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 ME1P48163 572 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 DNM2P50570 870 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 CRYBB1P53674 252 aaPredicted RBP17.21■□□□□ 0.35
LINC01220-201ENST00000558575 SLC12A3P55017 1021 aa17.21■□□□□ 0.35
LINC01220-201ENST00000558575 VCPP55072 806 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms