RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 TRIM27P14373 513 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 AKR1A1P14550 325 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 PLCG1P19174 1290 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 GDNFP39905 211 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 KCTD2Q14681 263 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 FYB2Q5VWT5 728 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 CCDC129Q6ZRS4 1044 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 TMEM179Q6ZVK1 233 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 RELL1Q8IUW5 271 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 SLC44A5Q8NCS7 719 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 FAM13CQ8NE31 585 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 NUP133Q8WUM0 1156 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 PPM1EQ8WY54 764 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 ATG4CQ96DT6 458 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 Q96M66 194 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 TOX2Q96NM4 488 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 TINF2Q9BSI4 451 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 CRNKL1Q9BZJ0 848 aaKnown RBP7.24□□□□□ -1.25
ZEB1-211ENST00000558440 CCDC8Q9H0W5 538 aaPredicted RBP7.24□□□□□ -1.25
ZEB1-211ENST00000558440 STARD7Q9NQZ5 370 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 MCM9Q9NXL9 1143 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.24□□□□□ -1.253e-8■■■■□ 21.3
ZEB1-211ENST00000558440 THEGQ9P2T0 379 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 CNPY2Q9Y2B0 182 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 BRWD1Q9NSI6 2320 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 PRRC2BQ5JSZ5 2229 aaKnown RBP7.23□□□□□ -1.25
ZEB1-211ENST00000558440 PIEZO1Q92508 2521 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.23□□□□□ -1.25
ZEB1-211ENST00000558440 WDR46O15213 610 aaKnown RBP7.23□□□□□ -1.25
ZEB1-211ENST00000558440 BCAR3O75815 825 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 TIMP1P01033 207 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 PGK2P07205 417 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 YARSP54577 528 aaKnown RBP7.23□□□□□ -1.25
ZEB1-211ENST00000558440 ATP8B2P98198 1209 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 ICA1Q05084 483 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 GABPAQ06546 454 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 PPIGQ13427 754 aaKnown RBP eCLIP7.23□□□□□ -1.253e-7■■■■■ 28.4
ZEB1-211ENST00000558440 PWP1Q13610 501 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 TMPRSS7Q7RTY8 843 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 ANKRD33Q7Z3H0 272 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 SPICE1Q8N0Z3 855 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 SSH3Q8TE77 659 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 ATXN2LQ8WWM7 1075 aaKnown RBP7.23□□□□□ -1.25
ZEB1-211ENST00000558440 CCDC120Q96HB5 630 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 ALPK1Q96QP1 1244 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 RIOK1Q9BRS2 568 aaKnown RBP7.23□□□□□ -1.25
ZEB1-211ENST00000558440 FAM53CQ9NYF3 392 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 SWAP70Q9UH65 585 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 DIS3Q9Y2L1 958 aaKnown RBP7.23□□□□□ -1.25
ZEB1-211ENST00000558440 MROH7Q68CQ1 1323 aa7.23□□□□□ -1.25
ZEB1-211ENST00000558440 UPK3BL1B0FP48 263 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 UPK3BL2E5RIL1 263 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 ESR1P03372 595 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 GBP2P32456 591 aaPredicted RBP7.22□□□□□ -1.25
ZEB1-211ENST00000558440 COPB2P35606 906 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 STAT3P40763 770 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 ACLYP53396 1101 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 MRPS5P82675 430 aaKnown RBP7.22□□□□□ -1.25
ZEB1-211ENST00000558440 TMEM132BQ14DG7 1078 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 TTF1Q15361 905 aaPredicted RBP7.22□□□□□ -1.25
ZEB1-211ENST00000558440 KIAA1755Q5JYT7 1200 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 AKNAD1Q5T1N1 836 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 MFSD5Q6N075 450 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 RIOX2Q8IUF8 465 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 AMOTL1Q8IY63 956 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 TMEM199Q8N511 208 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 EAF2Q96CJ1 260 aaPredicted RBP7.22□□□□□ -1.25
ZEB1-211ENST00000558440 KIRREL1Q96J84 757 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 GLT1D1Q96MS3 346 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 ASB2Q96Q27 587 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.22□□□□□ -1.25
ZEB1-211ENST00000558440 GZF1Q9H116 711 aaPredicted RBP7.22□□□□□ -1.25
ZEB1-211ENST00000558440 PRDM12Q9H4Q4 367 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 ANTXR1Q9H6X2 564 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 VCPKMTQ9H867 229 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 MSRAQ9UJ68 235 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 TNNQ9UQP3 1299 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 TMX2Q9Y320 296 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 SYNRGQ9UMZ2 1314 aa7.22□□□□□ -1.25
ZEB1-211ENST00000558440 GREB1LQ9C091 1923 aaPredicted RBP7.21□□□□□ -1.25
ZEB1-211ENST00000558440 LRRC10BA6NIK2 292 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 TLR3O15455 904 aaKnown RBP7.21□□□□□ -1.26
ZEB1-211ENST00000558440 GLI1P08151 1106 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 CYP2D6P10635 497 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 AKR1B1P15121 316 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 PDE6AP16499 860 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 PLA2G5P39877 138 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 MESP2Q0VG99 397 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 RAB30Q15771 203 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 KCNA10Q16322 511 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 SLC9C2Q5TAH2 1124 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 ZKSCAN2Q63HK3 967 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 PSRC1Q6PGN9 363 aaPredicted RBP7.21□□□□□ -1.26
ZEB1-211ENST00000558440 AACSQ86V21 672 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 ERC1Q8IUD2 1116 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 SLFN12Q8IYM2 578 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 TMEM57Q8N5G2 664 aa7.21□□□□□ -1.26
ZEB1-211ENST00000558440 MSL3Q8N5Y2 521 aaKnown RBP7.21□□□□□ -1.26
ZEB1-211ENST00000558440 PCSK9Q8NBP7 692 aaKnown RBP7.21□□□□□ -1.26
ZEB1-211ENST00000558440 SDR42E1Q8WUS8 393 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms