RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 POLRMTO00411 1230 aaKnown RBP16.63■□□□□ 0.25
AP4E1-202ENST00000558439 CROCCP2Q86T23 111 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 COL23A1Q86Y22 540 aaPredicted RBP16.63■□□□□ 0.25
AP4E1-202ENST00000558439 SLC35C1Q96A29 364 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 HAUS1Q96CS2 278 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 HSPBP1Q9NZL4 362 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 AIPL1Q9NZN9 384 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 MEIS2O14770 477 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 TLR2O60603 784 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 SLC12A3P55017 1021 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 OSTNP61366 133 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 GNPTABQ3T906 1256 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 BTBD6Q96KE9 485 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 PAGR1Q9BTK6 254 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 ISCUQ9H1K1 167 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 UNC45AQ9H3U1 944 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 HERC5Q9UII4 1024 aaKnown RBP16.63■□□□□ 0.25
AP4E1-202ENST00000558439 ANAPC5Q9UJX4 755 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 PHF20L1A8MW92 1017 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 M0R2N6 131 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 NOP56O00567 594 aaKnown RBP16.63■□□□□ 0.25
AP4E1-202ENST00000558439 C2CD6Q53TS8 623 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 MDM1Q8TC05 714 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 FAM118BQ9BPY3 351 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 C11orf70Q9BRQ4 267 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 CBWD1Q9BRT8 395 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 GABBR1Q9UBS5 961 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 TNFAIP1Q13829 316 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 SETDB1Q15047 1291 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 CCDC91Q7Z6B0 441 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 PRPF38AQ8NAV1 312 aaKnown RBP16.62■□□□□ 0.25
AP4E1-202ENST00000558439 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.62■□□□□ 0.25
AP4E1-202ENST00000558439 ZNF668Q96K58 619 aaPredicted RBP16.62■□□□□ 0.25
AP4E1-202ENST00000558439 KCNH7Q9NS40 1196 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 PNMA2Q9UL42 364 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 SYNGAP1Q96PV0 1343 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 MIF4GDA9UHW6 222 aaKnown RBP16.62■□□□□ 0.25
AP4E1-202ENST00000558439 GOLGA8SH3BPF8 625 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 YWHABP31946 246 aaKnown RBP16.62■□□□□ 0.25
AP4E1-202ENST00000558439 DYNLT1P63172 113 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 HDLBPQ00341 1268 aaKnown RBP16.62■□□□□ 0.25
AP4E1-202ENST00000558439 SWSAP1Q6NVH7 229 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 ZBTB33Q86T24 672 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 TTLL6Q8N841 843 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.62■□□□□ 0.25
AP4E1-202ENST00000558439 TACO1Q9BSH4 297 aaKnown RBP16.62■□□□□ 0.25
AP4E1-202ENST00000558439 POLR3CQ9BUI4 534 aaPredicted RBP16.62■□□□□ 0.25
AP4E1-202ENST00000558439 DNAJC5Q9H3Z4 198 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 TMEM150BA6NC51 233 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 ZNF473Q8WTR7 871 aaKnown RBP16.62■□□□□ 0.25
AP4E1-202ENST00000558439 RAB20Q9NX57 234 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 FEM1BQ9UK73 627 aa16.62■□□□□ 0.25
AP4E1-202ENST00000558439 TISP43B9A030 160 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 DDX3XO00571 662 aaKnown RBP eCLIP16.61■□□□□ 0.25
AP4E1-202ENST00000558439 PJA2O43164 708 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 COMTP21964 271 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 EIF3BP55884 814 aaKnown RBP16.61■□□□□ 0.25
AP4E1-202ENST00000558439 ERVK-9P63128 1117 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 ARSHQ5FYA8 562 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 SLC20A1Q8WUM9 679 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 RUNDC3BQ96NL0 473 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 JPH2Q9BR39 696 aaPredicted RBP16.61■□□□□ 0.25
AP4E1-202ENST00000558439 PI4K2AQ9BTU6 479 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 ZNF233A6NK53 670 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 HSPA6P17066 643 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 KIAA1755Q5JYT7 1200 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 HIBCHQ6NVY1 386 aaPredicted RBP16.61■□□□□ 0.25
AP4E1-202ENST00000558439 MAIP1Q8WWC4 291 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 RNF25Q96BH1 459 aaPredicted RBP16.61■□□□□ 0.25
AP4E1-202ENST00000558439 ADAM33Q9BZ11 813 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 EPN3Q9H201 632 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 BCAS3Q9H6U6 928 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 GGT7Q9UJ14 662 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 HNRNPH3P31942 346 aaKnown RBP16.61■□□□□ 0.25
AP4E1-202ENST00000558439 KRT39Q6A163 491 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 VCPKMTQ9H867 229 aa16.61■□□□□ 0.25
AP4E1-202ENST00000558439 RASSF10A6NK89 507 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 WDR64B1ANS9 1081 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 SLITRK3O94933 977 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 HHATQ5VTY9 493 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 MAK16Q9BXY0 300 aaKnown RBP16.6■□□□□ 0.25
AP4E1-202ENST00000558439 TRAF3IP3Q9Y228 551 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 CLDN3O15551 220 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 AARSP49588 968 aaKnown RBP eCLIP16.6■□□□□ 0.25
AP4E1-202ENST00000558439 CORO7P57737 925 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 ZNF720Q7Z2F6 126 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 SLC7A3Q8WY07 619 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 SUCLA2Q9P2R7 463 aaPredicted RBP16.6■□□□□ 0.25
AP4E1-202ENST00000558439 ZNF70Q9UC06 446 aaPredicted RBP16.6■□□□□ 0.25
AP4E1-202ENST00000558439 TTC7AQ9ULT0 858 aaPredicted RBP16.6■□□□□ 0.25
AP4E1-202ENST00000558439 PODXLO00592 558 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 ENTPD3O75355 529 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 FECHP22830 423 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 NUGGCQ68CJ6 796 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 TMEM270Q6UE05 265 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 FBF1Q8TES7 1133 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 POP1Q99575 1024 aaKnown RBP16.6■□□□□ 0.25
AP4E1-202ENST00000558439 KCNMB3Q9NPA1 279 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 ODF2LQ9ULJ1 636 aa16.6■□□□□ 0.25
AP4E1-202ENST00000558439 PPP1R9AQ9ULJ8 1098 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms