RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 CTC1Q2NKJ3 1217 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 PDE12Q6L8Q7 609 aaKnown RBP13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 GLB1LQ6UWU2 654 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 MAEAQ7L5Y9 396 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 LPPQ93052 612 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 NACC1Q96RE7 527 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 TRAIPQ9BWF2 469 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 MRPL9Q9BYD2 267 aaKnown RBP13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 MINDY3Q9H8M7 445 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 TUFT1Q9NNX1 390 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 AGPAT5Q9NUQ2 364 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 FAM105AQ9NUU6 356 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 TCF20Q9UGU0 1960 aaKnown RBP13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 INPP5FQ9Y2H2 1132 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 REV3LO60673 3130 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 LINC01565O15544 149 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 USO1O60763 962 aaKnown RBP13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 IL9P15248 144 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 ATF7P17544 494 aaPredicted RBP13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 SSTR3P32745 418 aaPredicted RBP13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 PPM1AP35813 382 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 PBX3P40426 434 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 TRAPPC10P48553 1259 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 RARRES1P49788 294 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 ERVFC1P60507 584 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 PLCB3Q01970 1234 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 ADAM15Q13444 863 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 COL19A1Q14993 1142 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 MCTP1Q6DN14 999 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 ADGRD2Q7Z7M1 963 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 CATSPER3Q86XQ3 398 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 MRPS27Q92552 414 aaKnown RBP13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 XPNPEP1Q9NQW7 623 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 ENTPD7Q9NQZ7 604 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 LZTS1Q9Y250 596 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 PCDHB2Q9Y5E7 798 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 PCDHGC5Q9Y5F6 944 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 VCANP13611 3396 aa13.76□□□□□ -0.21
CDC42BPB-202ENST00000558321 INO80B-WBP1J3KQ70 363 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 PER2O15055 1255 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 ZNF623O75123 536 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 MED24O75448 989 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 SPATA31C1P0DKV0 1188 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 U2AF2P26368 475 aaKnown RBP eCLIP13.75□□□□□ -0.216e-6■■■■□ 24.4
CDC42BPB-202ENST00000558321 LTBRP36941 435 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 MCM2P49736 904 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 BCAR1P56945 870 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 DLX2Q07687 328 aaPredicted RBP13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 NBR1Q14596 966 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 BMS1Q14692 1282 aaKnown RBP13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 NOMO2Q5JPE7 1267 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 PLPP4Q5VZY2 271 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 TMC7Q7Z402 723 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 FAM178BQ8IXR5 827 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 EFHBQ8N7U6 833 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 URGCPQ8TCY9 931 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 RSPH1Q8WYR4 309 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 TMX3Q96JJ7 454 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 TCF25Q9BQ70 676 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 POLR3CQ9BUI4 534 aaPredicted RBP13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 GBP3Q9H0R5 595 aa13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 POLR3FQ9H1D9 316 aaPredicted RBP13.75□□□□□ -0.21
CDC42BPB-202ENST00000558321 ARHGEF35A5YM69 484 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 NT5C1B-RDH14C9J2C7 533 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 H3BQV1 296 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 ZC3H11AO75152 810 aaKnown RBP eCLIP13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 OFD1O75665 1012 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 RPA1P27694 616 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 AXLP30530 894 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 HOXA11P31270 313 aaPredicted RBP13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 CA8P35219 290 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 ARL2P36404 184 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 CCT6AP40227 531 aaKnown RBP13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 PTENP60484 403 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 POU5F1BQ06416 359 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 PCBP1Q15365 356 aaKnown RBP eCLIP13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 POTEGQ6S5H5 508 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 GJD3Q8N144 294 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 ASAP3Q8TDY4 903 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 RAB34Q9BZG1 259 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 NGRNQ9NPE2 291 aaKnown RBP13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 LRWD1Q9UFC0 647 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 CD207Q9UJ71 328 aa13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 DBR1Q9UK59 544 aaKnown RBP13.74□□□□□ -0.21
CDC42BPB-202ENST00000558321 FSD2A1L4K1 749 aa13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 CARNS1A5YM72 827 aa13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 LRRIQ4A6NIV6 560 aa13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 MEIS3P2A8K0S8 358 aa13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 TBX10O75333 385 aa13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 ITGA4P13612 1032 aa13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 GLRA2P23416 452 aa13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 PTGDRQ13258 359 aa13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 CAPSQ13938 189 aa13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 HAUS3Q68CZ6 603 aa13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 NOTUMQ6P988 496 aa13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 AGMOQ6ZNB7 445 aa13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 MRPL10Q7Z7H8 261 aaKnown RBP13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 SLC39A11Q8N1S5 342 aa13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 C4orf32Q8N8J7 132 aa13.73□□□□□ -0.21
CDC42BPB-202ENST00000558321 TMEM87AQ8NBN3 555 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms