RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 CCDC47Q96A33 483 aaKnown RBP11.56□□□□□ -0.56
LRRC28-204ENST00000558172 PPP1R16BQ96T49 567 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 ZHX3Q9H4I2 956 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 TMEM134Q9H6X4 195 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 POLD4Q9HCU8 107 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 PANK4Q9NVE7 773 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 DACT1Q9NYF0 836 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 K7ERI5 159 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 MBD3O95983 291 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 GHRP10912 638 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 ACTN1P12814 892 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 NCKAP1LP55160 1127 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 MDM2Q00987 491 aaPredicted RBP11.55□□□□□ -0.56
LRRC28-204ENST00000558172 PAK2Q13177 524 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 PSMD2Q13200 908 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 CUL4BQ13620 913 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 GPNMBQ14956 572 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 POSTNQ15063 836 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 HERC4Q5GLZ8 1057 aaPredicted RBP11.55□□□□□ -0.56
LRRC28-204ENST00000558172 CNKSR3Q6P9H4 555 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 DEFB128Q7Z7B8 93 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 FAM178BQ8IXR5 827 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 TMEM40Q8WWA1 233 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 BSNDQ8WZ55 320 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 ZNF668Q96K58 619 aaPredicted RBP11.55□□□□□ -0.56
LRRC28-204ENST00000558172 PRIMPOLQ96LW4 560 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 FTHL17Q9BXU8 183 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 IFIH1Q9BYX4 1025 aaKnown RBP11.55□□□□□ -0.56
LRRC28-204ENST00000558172 BLZF1Q9H2G9 400 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 ST6GALNAC4Q9H4F1 302 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 CHST12Q9NRB3 414 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 OLFML3Q9NRN5 406 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 PRMT7Q9NVM4 692 aaPredicted RBP11.55□□□□□ -0.56
LRRC28-204ENST00000558172 ARHGAP28Q9P2N2 729 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 PADI3Q9ULW8 664 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 ST3GAL5Q9UNP4 418 aa11.55□□□□□ -0.56
LRRC28-204ENST00000558172 NOC2LQ9Y3T9 749 aaKnown RBP11.55□□□□□ -0.56
LRRC28-204ENST00000558172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.54□□□□□ -0.56
LRRC28-204ENST00000558172 INO80B-WBP1J3KQ70 363 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 EFCAB14O75071 495 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 ERLIN2O94905 339 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 SMC2O95347 1197 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 ZSCAN20P17040 1043 aaPredicted RBP11.54□□□□□ -0.56
LRRC28-204ENST00000558172 AXLP30530 894 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 CD52P31358 61 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 MBTD1Q05BQ5 628 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 DPYDQ12882 1025 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 NFX1Q12986 1120 aaKnown RBP11.54□□□□□ -0.56
LRRC28-204ENST00000558172 ALCAMQ13740 583 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 MAPK6Q16659 721 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 FAM187BQ17R55 369 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 PSRC1Q6PGN9 363 aaPredicted RBP11.54□□□□□ -0.56
LRRC28-204ENST00000558172 PPP4R3CPQ6ZMV5 832 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 STXBP4Q6ZWJ1 553 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 CATSPER4Q7RTX7 472 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 HAUS6Q7Z4H7 955 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 FAM228AQ86W67 206 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 GRAMD1CQ8IYS0 662 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 DBF4BQ8NFT6 615 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 FZD8Q9H461 694 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 AGO3Q9H9G7 860 aaKnown RBP11.54□□□□□ -0.56
LRRC28-204ENST00000558172 MRPL44Q9H9J2 332 aaKnown RBP11.54□□□□□ -0.56
LRRC28-204ENST00000558172 ERVK-5Q9HDB9 667 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 PCDHB13Q9Y5F0 798 aa11.54□□□□□ -0.56
LRRC28-204ENST00000558172 TTC3P53804 2025 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 H0YGN5 161 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 ACKR2O00590 384 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 SLC16A4O15374 487 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 KLRC4O43908 158 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 BAIAP3O94812 1187 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 FGBP02675 491 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 RPN1P04843 607 aaKnown RBP11.53□□□□□ -0.56
LRRC28-204ENST00000558172 MAGEA10P43363 369 aaPredicted RBP11.53□□□□□ -0.56
LRRC28-204ENST00000558172 GTF2BQ00403 316 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 STRN3Q13033 797 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 COASYQ13057 564 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 IKBKEQ14164 716 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 KCNB1Q14721 858 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 ZNF720Q7Z2F6 126 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 SFR1Q86XK3 245 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 TMEM161BQ8NDZ6 487 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 HVCN1Q96D96 273 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 GSDMAQ96QA5 445 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 FIZ1Q96SL8 496 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 GTPBP4Q9BZE4 634 aaKnown RBP11.53□□□□□ -0.56
LRRC28-204ENST00000558172 MINDY3Q9H8M7 445 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 EXOC1Q9NV70 894 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
LRRC28-204ENST00000558172 RMND1Q9NWS8 449 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 TNRC18O15417 2968 aaPredicted RBP11.53□□□□□ -0.56
LRRC28-204ENST00000558172 ADGRA3Q8IWK6 1321 aa11.53□□□□□ -0.56
LRRC28-204ENST00000558172 ABHD14A-ACY1A0A1B0GW23 586 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 DENND3A2RUS2 1198 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 K7ENM7 598 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 RHOBTB3O94955 611 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 PRKCBP05771 671 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 PRR29P0C7W0 189 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 ACRP10323 421 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 CASP1P29466 404 aa11.52□□□□□ -0.57
LRRC28-204ENST00000558172 NMT1P30419 496 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms