RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ZNF561-AS1K7EIQ3 104 aa7.95□□□□□ -1.14
RTF1-204ENST00000558117 MAN2B1O00754 1011 aa7.95□□□□□ -1.14
RTF1-204ENST00000558117 OPA1O60313 960 aa7.95□□□□□ -1.14
RTF1-204ENST00000558117 GYS1P13807 737 aa7.95□□□□□ -1.14
RTF1-204ENST00000558117 THBS2P35442 1172 aa7.95□□□□□ -1.14
RTF1-204ENST00000558117 KCNC1P48547 511 aa7.95□□□□□ -1.14
RTF1-204ENST00000558117 LACTBP83111 547 aaPredicted RBP7.95□□□□□ -1.14
RTF1-204ENST00000558117 CST9Q5W186 159 aa7.95□□□□□ -1.14
RTF1-204ENST00000558117 VASNQ6EMK4 673 aa7.95□□□□□ -1.14
RTF1-204ENST00000558117 SDE2Q6IQ49 451 aa7.95□□□□□ -1.14
RTF1-204ENST00000558117 KIAA0907Q7Z7F0 614 aaPredicted RBP7.95□□□□□ -1.14
RTF1-204ENST00000558117 ADGRG2Q8IZP9 1017 aa7.95□□□□□ -1.14
RTF1-204ENST00000558117 NLGN4XQ8N0W4 816 aa7.95□□□□□ -1.14
RTF1-204ENST00000558117 KCNH5Q8NCM2 988 aa7.95□□□□□ -1.14
RTF1-204ENST00000558117 KCNC2Q96PR1 638 aa7.95□□□□□ -1.14
RTF1-204ENST00000558117 CELF4Q9BZC1 486 aaKnown RBP7.95□□□□□ -1.14
RTF1-204ENST00000558117 PARD6AQ9NPB6 346 aa7.95□□□□□ -1.14
RTF1-204ENST00000558117 ADGRB1O14514 1584 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 ASLP04424 464 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 IGFALSP35858 605 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 SARSP49591 514 aaKnown RBP7.94□□□□□ -1.14
RTF1-204ENST00000558117 EPHA5P54756 1037 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 SLURP1P55000 103 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 PAN2Q504Q3 1202 aaKnown RBP7.94□□□□□ -1.14
RTF1-204ENST00000558117 TMC5Q6UXY8 1006 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 DHX37Q8IY37 1157 aaKnown RBP7.94□□□□□ -1.14
RTF1-204ENST00000558117 CARFQ8N187 725 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 TP53I13Q8NBR0 393 aaPredicted RBP7.94□□□□□ -1.14
RTF1-204ENST00000558117 NINJ1Q92982 152 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 ZSWIM3Q96MP5 696 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 FEZ1Q99689 392 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 SPATA25Q9BR10 227 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 RBPJLQ9UBG7 517 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 SRPK3Q9UPE1 567 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 WASF3Q9UPY6 502 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 TTC28Q96AY4 2481 aa7.94□□□□□ -1.14
RTF1-204ENST00000558117 ACOT7O00154 380 aa7.93□□□□□ -1.14
RTF1-204ENST00000558117 CYP7B1O75881 506 aa7.93□□□□□ -1.14
RTF1-204ENST00000558117 FAHP16930 419 aa7.93□□□□□ -1.14
RTF1-204ENST00000558117 PLA2G5P39877 138 aa7.93□□□□□ -1.14
RTF1-204ENST00000558117 DLX2Q07687 328 aaPredicted RBP7.93□□□□□ -1.14
RTF1-204ENST00000558117 PLEKHG4Q58EX7 1191 aa7.93□□□□□ -1.14
RTF1-204ENST00000558117 ZCCHC8Q6NZY4 707 aaKnown RBP7.93□□□□□ -1.14
RTF1-204ENST00000558117 SPATA6Q9NWH7 488 aaPredicted RBP7.93□□□□□ -1.14
RTF1-204ENST00000558117 SAMD15Q9P1V8 674 aa7.93□□□□□ -1.14
RTF1-204ENST00000558117 NFAT5O94916 1531 aa7.93□□□□□ -1.14
RTF1-204ENST00000558117 FAM90A27PA6NNH2 459 aa7.92□□□□□ -1.14
RTF1-204ENST00000558117 GLRX3O76003 335 aaKnown RBP7.92□□□□□ -1.14
RTF1-204ENST00000558117 RPL13P26373 211 aaKnown RBP7.92□□□□□ -1.14
RTF1-204ENST00000558117 TMEM177Q53S58 311 aa7.92□□□□□ -1.14
RTF1-204ENST00000558117 FIGNQ5HY92 759 aa7.92□□□□□ -1.14
RTF1-204ENST00000558117 PRAMEF18Q5VWM3 479 aa7.92□□□□□ -1.14
RTF1-204ENST00000558117 FSTL4Q6MZW2 842 aa7.92□□□□□ -1.14
RTF1-204ENST00000558117 NIM1KQ8IY84 436 aa7.92□□□□□ -1.14
RTF1-204ENST00000558117 USP40Q9NVE5 1235 aa7.92□□□□□ -1.14
RTF1-204ENST00000558117 CROTQ9UKG9 612 aa7.92□□□□□ -1.14
RTF1-204ENST00000558117 ATP23Q9Y6H3 246 aa7.92□□□□□ -1.14
RTF1-204ENST00000558117 LAMA3Q16787 3333 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 M0R2C6 588 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 JMJD7P0C870 316 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 EPHX2P34913 555 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 GJA4P35212 333 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 GJA9P57773 515 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 DDR1Q08345 913 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 ADAM9Q13443 819 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 ITPK1Q13572 414 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 BTBD8Q5XKL5 378 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 CDCA2Q69YH5 1023 aaPredicted RBP7.91□□□□□ -1.14
RTF1-204ENST00000558117 PROSER1Q86XN7 944 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 SYT8Q8NBV8 401 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 ZCRB1Q8TBF4 217 aaKnown RBP7.91□□□□□ -1.14
RTF1-204ENST00000558117 FEZF2Q8TBJ5 459 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 SNX27Q96L92 541 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 RIC8BQ9NVN3 520 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 SAGE1Q9NXZ1 904 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 HSPBP1Q9NZL4 362 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 MAGEC2Q9UBF1 373 aaPredicted RBP7.91□□□□□ -1.14
RTF1-204ENST00000558117 RAPGEFL1Q9UHV5 662 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 HACL1Q9UJ83 578 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 CCDC88AQ3V6T2 1871 aa7.91□□□□□ -1.14
RTF1-204ENST00000558117 SCN4AP35499 1836 aa7.9□□□□□ -1.14
RTF1-204ENST00000558117 NPTXRO95502 500 aa7.9□□□□□ -1.14
RTF1-204ENST00000558117 PTPN1P18031 435 aaKnown RBP7.9□□□□□ -1.14
RTF1-204ENST00000558117 GYS2P54840 703 aa7.9□□□□□ -1.14
RTF1-204ENST00000558117 SEC23AQ15436 765 aa7.9□□□□□ -1.14
RTF1-204ENST00000558117 PKN2Q16513 984 aaKnown RBP7.9□□□□□ -1.14
RTF1-204ENST00000558117 PIK3R6Q5UE93 754 aa7.9□□□□□ -1.14
RTF1-204ENST00000558117 CPZQ66K79 652 aa7.9□□□□□ -1.14
RTF1-204ENST00000558117 CNNM4Q6P4Q7 775 aa7.9□□□□□ -1.14
RTF1-204ENST00000558117 TTLL10Q6ZVT0 673 aa7.9□□□□□ -1.14
RTF1-204ENST00000558117 DDX53Q86TM3 631 aaKnown RBP7.9□□□□□ -1.14
RTF1-204ENST00000558117 PNMA8AQ86V59 439 aaPredicted RBP7.9□□□□□ -1.14
RTF1-204ENST00000558117 DLL4Q9NR61 685 aa7.9□□□□□ -1.14
RTF1-204ENST00000558117 INTS7Q9NVH2 962 aaKnown RBP7.9□□□□□ -1.14
RTF1-204ENST00000558117 INSRP06213 1382 aa7.89□□□□□ -1.15
RTF1-204ENST00000558117 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.89□□□□□ -1.15
RTF1-204ENST00000558117 B4E1Z4 1266 aa7.89□□□□□ -1.15
RTF1-204ENST00000558117 TRAF5O00463 557 aa7.89□□□□□ -1.15
RTF1-204ENST00000558117 HSD3B2P26439 372 aa7.89□□□□□ -1.15
RTF1-204ENST00000558117 MECP2P51608 486 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms