RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 COPS5Q92905 334 aa7.53□□□□□ -1.2
CLPX-202ENST00000558103 KCNN1Q92952 543 aa7.53□□□□□ -1.2
CLPX-202ENST00000558103 ARMC5Q96C12 935 aa7.53□□□□□ -1.2
CLPX-202ENST00000558103 LGR4Q9BXB1 951 aa7.53□□□□□ -1.2
CLPX-202ENST00000558103 TMEM39BQ9GZU3 492 aa7.53□□□□□ -1.2
CLPX-202ENST00000558103 EPN3Q9H201 632 aa7.53□□□□□ -1.2
CLPX-202ENST00000558103 TDRD3Q9H7E2 651 aaKnown RBP7.53□□□□□ -1.2
CLPX-202ENST00000558103 C9orf78Q9NZ63 289 aaPredicted RBP7.53□□□□□ -1.2
CLPX-202ENST00000558103 RIPOR2Q9Y4F9 1068 aa7.53□□□□□ -1.2
CLPX-202ENST00000558103 RPAP1Q9BWH6 1393 aaPredicted RBP7.53□□□□□ -1.2
CLPX-202ENST00000558103 MROH5Q6ZUA9 1318 aa7.52□□□□□ -1.2
CLPX-202ENST00000558103 ZNF521Q96K83 1311 aa7.52□□□□□ -1.2
CLPX-202ENST00000558103 DBX1A6NMT0 343 aa7.52□□□□□ -1.21
CLPX-202ENST00000558103 OTUD7BQ6GQQ9 843 aa7.52□□□□□ -1.21
CLPX-202ENST00000558103 CKAP2LQ8IYA6 745 aa7.52□□□□□ -1.21
CLPX-202ENST00000558103 BRI3BPQ8WY22 251 aa7.52□□□□□ -1.21
CLPX-202ENST00000558103 PPP1R16BQ96T49 567 aa7.52□□□□□ -1.21
CLPX-202ENST00000558103 NKX2-4Q9H2Z4 354 aa7.52□□□□□ -1.21
CLPX-202ENST00000558103 BICC1Q9H694 974 aaKnown RBP7.52□□□□□ -1.21
CLPX-202ENST00000558103 LAMA3Q16787 3333 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 TRBV23OR9-2A0A075B6M9 112 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 CCL15-CCL14A0A0B4J2E2 113 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 MYOCOSA0A1B0GUC4 107 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 TCP10L2B9ZVM9 353 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 IGSF3O75054 1194 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 PDE8BO95263 885 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 MPOP05164 745 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 TMEM253P0C7T8 217 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 MSL3P1P0C860 447 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 PAMP19021 973 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 SDHBP21912 280 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 HOXC12P31275 282 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 YBX1P67809 324 aaKnown RBP7.51□□□□□ -1.21
CLPX-202ENST00000558103 SCRN1Q12765 414 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 PKN1Q16512 942 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 CCL15Q16663 113 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 LRRC24Q50LG9 513 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 SLC4A10Q6U841 1118 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 ZNF227Q86WZ6 799 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 FAM43AQ8N2R8 423 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 ANKRD44Q8N8A2 993 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 GCC1Q96CN9 775 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 ZNF333Q96JL9 665 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 KRTAP9-8Q9BYQ0 159 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 GPRC5CQ9NQ84 441 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 PDLIM7Q9NR12 457 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 CDK5RAP2Q96SN8 1893 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 KIF16BQ96L93 1317 aa7.51□□□□□ -1.21
CLPX-202ENST00000558103 NPHP3-ACAD11A0A0J9YXS1 232 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 HRKO00198 91 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 KRT1P04264 644 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 CAPNS1P04632 268 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 GTF2A2P52657 109 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 CACNB3P54284 484 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 CORO7P57737 925 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 SF3A1Q15459 793 aaKnown RBP7.5□□□□□ -1.21
CLPX-202ENST00000558103 FAM83AQ86UY5 434 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 CPNE8Q86YQ8 564 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 TBC1D22AQ8WUA7 517 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 BTN2A2Q8WVV5 523 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 TEKT1Q969V4 418 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 CCDC140Q96MF4 163 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 MMP19Q99542 508 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 TRIM55Q9BYV6 548 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 ZCCHC17Q9NP64 241 aaKnown RBP7.5□□□□□ -1.21
CLPX-202ENST00000558103 TNFRSF12AQ9NP84 129 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 KLHL14Q9P2G3 628 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 PTCH2Q9Y6C5 1203 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 LOC285556D6RIA3 1793 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 ALPK3Q96L96 1907 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 FOCADQ5VW36 1801 aa7.5□□□□□ -1.21
CLPX-202ENST00000558103 DOCK3Q8IZD9 2030 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 AGRPO00253 132 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 ETV2O00321 342 aaPredicted RBP7.49□□□□□ -1.21
CLPX-202ENST00000558103 ABLIM1O14639 778 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 TBX1O43435 398 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 TLR2O60603 784 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 PLS3P13797 630 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 EN2P19622 333 aaPredicted RBP7.49□□□□□ -1.21
CLPX-202ENST00000558103 FGFR2P21802 821 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 GTF2F1P35269 517 aaKnown RBP eCLIP7.49□□□□□ -1.21
CLPX-202ENST00000558103 CYP4F3Q08477 520 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 RBL2Q08999 1139 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 CHAF1AQ13111 956 aaPredicted RBP7.49□□□□□ -1.21
CLPX-202ENST00000558103 CBX2Q14781 532 aaPredicted RBP7.49□□□□□ -1.21
CLPX-202ENST00000558103 SLC10A6Q3KNW5 377 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 CAVIN4Q5BKX8 364 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 HABP4Q5JVS0 413 aaKnown RBP7.49□□□□□ -1.21
CLPX-202ENST00000558103 METTL24Q5JXM2 366 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 FKBP1CQ5VVH2 108 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 APOBEC3HQ6NTF7 200 aaKnown RBP7.49□□□□□ -1.21
CLPX-202ENST00000558103 ERO1BQ86YB8 467 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 KLHDC4Q8TBB5 520 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 SREK1Q8WXA9 508 aaKnown RBP7.49□□□□□ -1.21
CLPX-202ENST00000558103 DRC1Q96MC2 740 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 MRIQ9BWK5 157 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 CLEC1BQ9P126 229 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 COL6A3P12111 3177 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 MAST3O60307 1309 aa7.49□□□□□ -1.21
CLPX-202ENST00000558103 PTPRCP08575 1304 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms