RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 EPHB6O15197 1021 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 CLCN3P51790 818 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 TMEM139Q8IV31 216 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 TMX1Q9H3N1 280 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 HSPBP1Q9NZL4 362 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 IGKV6-21A0A0C4DH24 114 aa22.33■■□□□ 1.17
SNRPA1-205ENST00000558036 HNRNPDLO14979 420 aaKnown RBP22.33■■□□□ 1.17
SNRPA1-205ENST00000558036 SLC9A9Q8IVB4 645 aa22.33■■□□□ 1.17
SNRPA1-205ENST00000558036 TRIB2Q92519 343 aa22.33■■□□□ 1.17
SNRPA1-205ENST00000558036 MMRN2Q9H8L6 949 aa22.33■■□□□ 1.17
SNRPA1-205ENST00000558036 EXOC7Q9UPT5 735 aa22.33■■□□□ 1.17
SNRPA1-205ENST00000558036 GOLGA8IPA6NC78 632 aa22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 GOLGA8JA6NMD2 632 aa22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 SRGAP2CP0DJJ0 459 aa22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 HOXD8P13378 290 aaPredicted RBP22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 APBA1Q02410 837 aa22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 KCNMA1Q12791 1236 aa22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 PPP2R5AQ15172 486 aa22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 EFCAB12Q6NXP0 572 aa22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 TRPV1Q8NER1 839 aa22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 SLC35C1Q96A29 364 aa22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 HVCN1Q96D96 273 aa22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 BICD1Q96G01 975 aa22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 BAG1Q99933 345 aaPredicted RBP22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 METTL14Q9HCE5 456 aaKnown RBP22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 AGPAT5Q9NUQ2 364 aa22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 ZNF215Q9UL58 517 aaPredicted RBP22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 PPME1Q9Y570 386 aa22.33■■□□□ 1.16
SNRPA1-205ENST00000558036 ZNF500O60304 480 aaPredicted RBP22.32■■□□□ 1.16
SNRPA1-205ENST00000558036 C22orf31O95567 290 aa22.32■■□□□ 1.16
SNRPA1-205ENST00000558036 TPM1P09493 284 aa22.32■■□□□ 1.16
SNRPA1-205ENST00000558036 LAMTOR4Q0VGL1 99 aa22.32■■□□□ 1.16
SNRPA1-205ENST00000558036 IER5Q5VY09 327 aa22.32■■□□□ 1.16
SNRPA1-205ENST00000558036 RHPN2Q8IUC4 686 aa22.32■■□□□ 1.16
SNRPA1-205ENST00000558036 CNGA4Q8IV77 575 aa22.32■■□□□ 1.16
SNRPA1-205ENST00000558036 PSPC1Q8WXF1 523 aaKnown RBP22.32■■□□□ 1.16
SNRPA1-205ENST00000558036 TTYH3Q9C0H2 523 aa22.32■■□□□ 1.16
SNRPA1-205ENST00000558036 SUCLA2Q9P2R7 463 aaPredicted RBP22.32■■□□□ 1.16
SNRPA1-205ENST00000558036 FAM184BQ9ULE4 1060 aa22.32■■□□□ 1.16
SNRPA1-205ENST00000558036 A6NJR5 290 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 TULP1O00294 542 aaPredicted RBP22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 EDN1P05305 212 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 KRT9P35527 623 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 VEGFBP49765 207 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 SP3Q02447 781 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 TRIM32Q13049 653 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 TRIM14Q14142 442 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 SAAL1Q96ER3 474 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 CEP350Q5VT06 3117 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 TRIM49P0CI25 452 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 TRIM49CP0CI26 452 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 KLRC1P26715 233 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 BEX3Q00994 111 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 RNF149Q8NC42 400 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 MKNK1Q9BUB5 465 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 ABHD10Q9NUJ1 306 aa22.31■■□□□ 1.16
SNRPA1-205ENST00000558036 K7ERI5 159 aa22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 AFPP02771 609 aaKnown RBP22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 ZNF484Q5JVG2 852 aa22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 C12orf56Q8IXR9 622 aa22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 XXYLT1Q8NBI6 393 aa22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 TCP11Q8WWU5 503 aa22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 PANX2Q96RD6 677 aa22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 RNF186Q9NXI6 227 aa22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 CGNQ9P2M7 1197 aaKnown RBP22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 CAPN11Q9UMQ6 739 aa22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 MGAMO43451 1857 aa22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 H0YCG3 227 aa22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 STRN3Q13033 797 aa22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 NOLC1Q14978 699 aaKnown RBP eCLIP22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 CCDC112Q8NEF3 446 aa22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 NLRP4Q96MN2 994 aa22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 PPP1R16BQ96T49 567 aa22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 LUC7L2Q9Y383 392 aaKnown RBP22.3■■□□□ 1.16
SNRPA1-205ENST00000558036 USP27XA6NNY8 438 aa22.29■■□□□ 1.16
SNRPA1-205ENST00000558036 ADCY3O60266 1144 aa22.29■■□□□ 1.16
SNRPA1-205ENST00000558036 DLG4P78352 724 aa22.29■■□□□ 1.16
SNRPA1-205ENST00000558036 PPFIA1Q13136 1202 aa22.29■■□□□ 1.16
SNRPA1-205ENST00000558036 IRF5Q13568 498 aa22.29■■□□□ 1.16
SNRPA1-205ENST00000558036 MYBPC2Q14324 1141 aa22.29■■□□□ 1.16
SNRPA1-205ENST00000558036 BRDTQ58F21 947 aaPredicted RBP22.29■■□□□ 1.16
SNRPA1-205ENST00000558036 CBWD2Q8IUF1 395 aa22.29■■□□□ 1.16
SNRPA1-205ENST00000558036 POMGNT1Q8WZA1 660 aa22.29■■□□□ 1.16
SNRPA1-205ENST00000558036 TTLL13PA6NNM8 815 aa22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 NRDCO43847 1150 aa22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 GAS2O43903 313 aaKnown RBP22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 LIG4P49917 911 aa22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 MXD4Q14582 209 aaPredicted RBP22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 GPIHBP1Q8IV16 184 aa22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 EXOC8Q8IYI6 725 aa22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 JPH2Q9BR39 696 aaPredicted RBP22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 KCNG1Q9UIX4 513 aa22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 SOWAHDA6NJG2 315 aa22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 ADRB2P07550 413 aa22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 SNRPFP62306 86 aaKnown RBP22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 BFSP1Q12934 665 aa22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 MTF1Q14872 753 aa22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 GRIK4Q16099 956 aa22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 REM2Q8IYK8 340 aaPredicted RBP22.28■■□□□ 1.16
SNRPA1-205ENST00000558036 TMEM174Q8WUU8 243 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms