RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 VAV3Q9UKW4 847 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 NR2E1Q9Y466 385 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 CARNS1A5YM72 827 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 ZC3H11AO75152 810 aaKnown RBP eCLIP17.88■□□□□ 0.45
SCFD1-224ENST00000557713 QARSP47897 775 aaKnown RBP17.88■□□□□ 0.45
SCFD1-224ENST00000557713 RAB27AP51159 221 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 POLGP54098 1239 aaPredicted RBP17.88■□□□□ 0.45
SCFD1-224ENST00000557713 PTPN5P54829 565 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 TCF15Q12870 199 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 STK3Q13188 491 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 PPP2R5CQ13362 524 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 BMS1Q14692 1282 aaKnown RBP17.88■□□□□ 0.45
SCFD1-224ENST00000557713 NOMO2Q5JPE7 1267 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 PLA2G4FQ68DD2 849 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 CES5AQ6NT32 575 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 CPLX2Q6PUV4 134 aaKnown RBP17.88■□□□□ 0.45
SCFD1-224ENST00000557713 GLB1LQ6UWU2 654 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 CATSPER4Q7RTX7 472 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 ZNF579Q8NAF0 562 aaKnown RBP17.88■□□□□ 0.45
SCFD1-224ENST00000557713 BCL7CQ8WUZ0 217 aaPredicted RBP17.88■□□□□ 0.45
SCFD1-224ENST00000557713 AUTS2Q8WXX7 1259 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 FAM20AQ96MK3 541 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 NECTIN4Q96NY8 510 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 PHF20Q9BVI0 1012 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 POMKQ9H5K3 350 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 KCNJ14Q9UNX9 436 aa17.88■□□□□ 0.45
SCFD1-224ENST00000557713 CTSAP10619 480 aa17.87■□□□□ 0.45
SCFD1-224ENST00000557713 SP100P23497 879 aaPredicted RBP17.87■□□□□ 0.45
SCFD1-224ENST00000557713 AVPR2P30518 371 aa17.87■□□□□ 0.45
SCFD1-224ENST00000557713 VCPP55072 806 aaKnown RBP17.87■□□□□ 0.45
SCFD1-224ENST00000557713 NPEPPSP55786 919 aa17.87■□□□□ 0.45
SCFD1-224ENST00000557713 LETM2Q2VYF4 491 aa17.87■□□□□ 0.45
SCFD1-224ENST00000557713 PPP4R3AQ6IN85 833 aa17.87■□□□□ 0.45
SCFD1-224ENST00000557713 MRPL10Q7Z7H8 261 aaKnown RBP17.87■□□□□ 0.45
SCFD1-224ENST00000557713 SLC22A17Q8WUG5 538 aa17.87■□□□□ 0.45
SCFD1-224ENST00000557713 NLRP4Q96MN2 994 aa17.87■□□□□ 0.45
SCFD1-224ENST00000557713 DHX33Q9H6R0 707 aaKnown RBP17.87■□□□□ 0.45
SCFD1-224ENST00000557713 WRAP73Q9P2S5 460 aaPredicted RBP17.87■□□□□ 0.45
SCFD1-224ENST00000557713 DNAJB4Q9UDY4 337 aa17.87■□□□□ 0.45
SCFD1-224ENST00000557713 COL4A3BPQ9Y5P4 624 aa17.87■□□□□ 0.45
SCFD1-224ENST00000557713 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.86■□□□□ 0.45
SCFD1-224ENST00000557713 C2CD4DB7Z1M9 353 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 DKC1O60832 514 aaKnown RBP eCLIP17.86■□□□□ 0.45
SCFD1-224ENST00000557713 P4HBP07237 508 aaKnown RBP17.86■□□□□ 0.45
SCFD1-224ENST00000557713 CA8P35219 290 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 MTHFRP42898 656 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 GIT2Q14161 759 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 KANK3Q6NY19 840 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 AGMOQ6ZNB7 445 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 ZNF280BQ86YH2 543 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 C12orf76Q8N812 135 aaPredicted RBP17.86■□□□□ 0.45
SCFD1-224ENST00000557713 KREMEN2Q8NCW0 462 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 PRPF31Q8WWY3 499 aaKnown RBP17.86■□□□□ 0.45
SCFD1-224ENST00000557713 HAS1Q92839 578 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 PGBD4Q96DM1 585 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 RIPOR3Q96MK2 946 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 VN1R3Q9BXE9 311 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 TSHZ2Q9NRE2 1034 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 PDRG1Q9NUG6 133 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 AGPAT5Q9NUQ2 364 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 DZANK1Q9NVP4 752 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 INPP5FQ9Y2H2 1132 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 PPME1Q9Y570 386 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 PCDHB2Q9Y5E7 798 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 KMT2EQ8IZD2 1858 aa17.86■□□□□ 0.45
SCFD1-224ENST00000557713 B4GALT3O60512 393 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 WEE2P0C1S8 567 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 EPCAMP16422 314 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 HOXA11P31270 313 aaPredicted RBP17.85■□□□□ 0.45
SCFD1-224ENST00000557713 SLC11A1P49279 550 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 RNASELQ05823 741 aaKnown RBP17.85■□□□□ 0.45
SCFD1-224ENST00000557713 SCRN1Q12765 414 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 EPHA7Q15375 998 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 UBXN11Q5T124 520 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 RARS2Q5T160 578 aaKnown RBP17.85■□□□□ 0.45
SCFD1-224ENST00000557713 SRGAP1Q7Z6B7 1085 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 NEK8Q86SG6 692 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 ZBTB33Q86T24 672 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 EXOC8Q8IYI6 725 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 SLC7A3Q8WY07 619 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 TMEM143Q96AN5 459 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 CEP170P1Q96L14 293 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 SLKQ9H2G2 1235 aaPredicted RBP17.85■□□□□ 0.45
SCFD1-224ENST00000557713 MINDY3Q9H8M7 445 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 SORCS3Q9UPU3 1222 aa17.85■□□□□ 0.45
SCFD1-224ENST00000557713 CCDC194A0A1B0GVG4 234 aa17.84■□□□□ 0.45
SCFD1-224ENST00000557713 TBX3O15119 743 aa17.84■□□□□ 0.45
SCFD1-224ENST00000557713 DDHD2O94830 711 aa17.84■□□□□ 0.45
SCFD1-224ENST00000557713 PDGFBP01127 241 aaPredicted RBP17.84■□□□□ 0.45
SCFD1-224ENST00000557713 SRGAP2CP0DJJ0 459 aa17.84■□□□□ 0.45
SCFD1-224ENST00000557713 GCFC2P16383 781 aaKnown RBP17.84■□□□□ 0.45
SCFD1-224ENST00000557713 RFC5P40937 340 aa17.84■□□□□ 0.45
SCFD1-224ENST00000557713 AFF1P51825 1210 aaKnown RBP17.84■□□□□ 0.45
SCFD1-224ENST00000557713 LAMTOR4Q0VGL1 99 aa17.84■□□□□ 0.45
SCFD1-224ENST00000557713 ATAT1Q5SQI0 421 aa17.84■□□□□ 0.45
SCFD1-224ENST00000557713 KIAA1841Q6NSI8 718 aa17.84■□□□□ 0.45
SCFD1-224ENST00000557713 C4orf19Q8IY42 314 aa17.84■□□□□ 0.45
SCFD1-224ENST00000557713 UBALD2Q8IYN6 164 aa17.84■□□□□ 0.45
SCFD1-224ENST00000557713 OXER1Q8TDS5 423 aa17.84■□□□□ 0.45
SCFD1-224ENST00000557713 GBP3Q9H0R5 595 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms