RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ATP2A2P16615 1042 aaKnown RBP15.12■□□□□ 0.01
SHMT2-234ENST00000557703 GAP43P17677 238 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 RAB27AP51159 221 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 MCM6Q14566 821 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 RAB30Q15771 203 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 MAPK6Q16659 721 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 ARSHQ5FYA8 562 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 KANK3Q6NY19 840 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 CATSPER4Q7RTX7 472 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 APBB1IPQ7Z5R6 666 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-234ENST00000557703 CNNM3Q8NE01 707 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 DEPTORQ8TB45 409 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 ASAP3Q8TDY4 903 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 TOP1MTQ969P6 601 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 RUSC1Q9BVN2 902 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 FZD8Q9H461 694 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 HPSEQ9Y251 543 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 MICAL3Q7RTP6 2002 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 A0A0U1RQF3 1178 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 LRRIQ4A6NIV6 560 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 HOXA2O43364 376 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 ZNF623O75123 536 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 TBCAO75347 108 aaKnown RBP15.11■□□□□ 0.01
SHMT2-234ENST00000557703 EOMESO95936 686 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 KRT18P05783 430 aaKnown RBP15.11■□□□□ 0.01
SHMT2-234ENST00000557703 SARSP49591 514 aaKnown RBP15.11■□□□□ 0.01
SHMT2-234ENST00000557703 FAM189BP81408 668 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 MAPK7Q13164 816 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 GIT2Q14161 759 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 DSC3Q14574 896 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 NOTUMQ6P988 496 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 KSR1Q8IVT5 923 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 CEP57L1Q8IYX8 460 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 DAW1Q8N136 415 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 PDILTQ8N807 584 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 TMEM87AQ8NBN3 555 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 MRPS27Q92552 414 aaKnown RBP15.11■□□□□ 0.01
SHMT2-234ENST00000557703 DDX12PQ92771 950 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 ST6GALNAC4Q9H4F1 302 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 GPRC5CQ9NQ84 441 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 AGPAT5Q9NUQ2 364 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 ARHGAP28Q9P2N2 729 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 INSL6Q9Y581 213 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 PCDHA11Q9Y5I1 949 aa15.11■□□□□ 0.01
SHMT2-234ENST00000557703 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-234ENST00000557703 CARNS1A5YM72 827 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 INO80B-WBP1J3KQ70 363 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 K7ERI5 159 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 ACKR2O00590 384 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 FAM13AO94988 1023 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 GJB5O95377 273 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 SYKP43405 635 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 NPTX2P47972 431 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 MBTD1Q05BQ5 628 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 ALCAMQ13740 583 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 HABP4Q5JVS0 413 aaKnown RBP15.1■□□□□ 0.01
SHMT2-234ENST00000557703 MAEAQ7L5Y9 396 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 NPAS4Q8IUM7 802 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 RAD9AQ99638 391 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 ADAM2Q99965 735 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 C7orf25Q9BPX7 421 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 REEP2Q9BRK0 252 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 KMT5AQ9NQR1 393 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 OLFML3Q9NRN5 406 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 CXXC1Q9P0U4 656 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-234ENST00000557703 MSRAQ9UJ68 235 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 SIP14410 1827 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 LAMA3Q16787 3333 aa15.1■□□□□ 0.01
SHMT2-234ENST00000557703 A0A1B0GUA9 196 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 PVALEFA0A1B0GWK0 134 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 FRMD3A2A2Y4 597 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 CCDC169A6NNP5 214 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 C9IYK1 514 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 PFKFB1P16118 471 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 PEX3P56589 373 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 FAM109BQ6ICB4 259 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-234ENST00000557703 HERC6Q8IVU3 1022 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 CCDC65Q8IXS2 484 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 ELOA2Q8IYF1 753 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-234ENST00000557703 HACE1Q8IYU2 909 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 CRIPAKQ8N1N5 446 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 LRRC15Q8TF66 581 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 HVCN1Q96D96 273 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 PANK2Q9BZ23 570 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 TMX1Q9H3N1 280 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 UBN1Q9NPG3 1134 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 TMEM161AQ9NX61 479 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 MYH11P35749 1972 aa15.09■□□□□ 0.01
SHMT2-234ENST00000557703 A0A087X0B3 334 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 MYMKA6NI61 221 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 TRAK2O60296 914 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 HOXA11P31270 313 aaPredicted RBP15.08■□□□□ 0
SHMT2-234ENST00000557703 NCKAP1LP55160 1127 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 HTRA4P83105 476 aaPredicted RBP15.08■□□□□ 0
SHMT2-234ENST00000557703 STRN3Q13033 797 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 DHX8Q14562 1220 aaKnown RBP15.08■□□□□ 0
SHMT2-234ENST00000557703 STXBP4Q6ZWJ1 553 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 RTN4RL1Q86UN2 441 aaPredicted RBP15.08■□□□□ 0
SHMT2-234ENST00000557703 MYOCDQ8IZQ8 938 aa15.08■□□□□ 0
SHMT2-234ENST00000557703 MYCT1Q8N699 235 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms